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PDBsum entry 1yu6
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Pore analysis for: 1yu6 calculated with  MOLE 2.0
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PDB id
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1yu6
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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4 pores,
coloured by radius |
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4 pores,
coloured by radius
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4 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.20 |
3.50 |
25.4 |
-2.32 |
-0.39 |
15.9 |
77 |
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4 |
0 |
3 |
2 |
2 |
2 |
0 |
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2 |
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2.09 |
2.20 |
36.8 |
-1.34 |
-0.58 |
9.7 |
88 |
3 |
0 |
5 |
1 |
3 |
0 |
1 |
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3 |
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3.02 |
3.02 |
37.7 |
-0.34 |
-0.11 |
6.0 |
79 |
2 |
0 |
3 |
5 |
3 |
2 |
0 |
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4 |
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2.09 |
2.20 |
63.1 |
-1.76 |
-0.53 |
13.9 |
86 |
6 |
0 |
8 |
2 |
5 |
2 |
1 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program