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PDBsum entry 1yrs

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1yrs calculated with MOLE 2.0 PDB id
1yrs
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.47 59.1 -1.10 -0.35 16.0 77 6 2 1 3 3 2 0  ADP 600 B MG 602 B L47 603 B
2 1.64 1.86 64.7 -1.57 -0.44 18.7 85 4 3 6 2 1 1 0  ADP 600 B
3 1.35 1.49 97.4 -1.35 -0.44 15.1 85 5 4 10 5 4 1 0  ADP 600 B MG 602 B L47 603 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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