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PDBsum entry 1yo2

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Cleft analysis for: 1yo2 PDB id
1yo2
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 3226.92 3.37 66.06 4 11.49 2 15.65 1 11 7 8 13 7 10 0  
2 956.81 0.00 63.29 5 9.39 3 7.42 7 5 3 6 3 2 4 0  
3 675.00 0.00 59.71 8 5.55 7 8.30 3 5 1 2 3 5 1 0  
4 550.55 0.00 52.04 10 4.51 8 8.96 2 3 2 2 3 0 4 0  
5 471.23 0.00 76.67 1 9.27 4 8.11 4 5 2 2 2 1 4 0  
6 614.25 0.00 63.09 6 6.20 6 7.65 6 4 3 4 4 1 2 0  
7 377.16 0.00 66.34 3 12.95 1 7.77 5 1 2 5 1 2 0 0  
8 337.50 0.00 66.63 2 8.00 5 6.16 8 2 2 2 3 2 2 0  
9 298.69 0.00 59.84 7 3.91 10 6.10 10 2 4 4 0 0 2 0  
10 288.98 0.00 55.95 9 3.97 9 6.10 9 2 1 0 3 0 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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