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PDBsum entry 1yo1

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Cleft analysis for: 1yo1 PDB id
1yo1
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 3367.41 4.37 65.71 4 11.74 1 16.25 1 11 7 10 13 7 10 0 SO4 261[A] (4 atoms)
2 771.19 0.00 66.27 3 9.36 5 7.03 5 5 3 5 3 2 4 0  
3 564.05 0.00 57.38 9 5.79 7 8.61 2 4 0 2 3 3 0 0  
4 468.28 0.00 77.39 1 10.53 2 7.49 4 5 2 2 2 1 4 0  
5 571.22 0.00 65.41 5 6.63 6 6.28 7 4 3 4 5 1 2 0  
6 486.00 0.00 53.22 10 3.12 10 8.54 3 2 2 2 3 0 3 0  
7 371.67 0.00 63.66 7 9.50 4 6.62 6 1 2 5 1 2 0 0  
8 358.17 0.00 64.40 6 10.19 3 6.15 8 1 3 2 3 2 2 0  
9 294.47 0.00 59.46 8 3.38 9 5.97 9 2 4 4 0 0 1 0  
10 224.44 0.00 77.31 2 5.19 8 0.00 10 5 1 1 0 3 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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