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PDBsum entry 1yo0

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Tunnel analysis for: 1yo0 calculated with MOLE 2.0 PDB id
1yo0
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.40 10.8 1.24 0.10 1.7 91 0 0 1 4 0 0 0  
2 1.61 12.6 1.02 0.18 10.2 91 0 2 0 4 0 0 0  
3 1.31 9.0 3.87 1.14 0.1 61 0 0 0 6 0 0 0  
4 1.80 5.3 -0.37 -0.11 20.5 67 2 1 0 3 0 0 0  
5 2.01 9.5 -2.09 -0.48 26.7 67 2 1 1 0 2 0 0  
6 1.43 9.8 -1.00 0.03 22.4 63 1 1 0 0 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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