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PDBsum entry 1ylc
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Tunnel analysis for: 1ylc calculated with  MOLE 2.0
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PDB id
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1ylc
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.67 |
1.68 |
16.1 |
-0.40 |
-0.06 |
7.2 |
58 |
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1 |
0 |
0 |
0 |
2 |
1 |
0 |
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ABA 5 B ABA 51 B ABA 55 B
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2 |
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2.15 |
2.26 |
16.4 |
0.48 |
0.23 |
2.0 |
71 |
0 |
0 |
1 |
3 |
3 |
0 |
0 |
ABA 30 B ABA 51 B ABA 55 B
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3 |
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1.26 |
1.26 |
17.0 |
-0.67 |
-0.21 |
3.5 |
76 |
1 |
0 |
2 |
1 |
3 |
0 |
0 |
ABA 5 B ABA 55 B
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4 |
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1.69 |
1.69 |
17.2 |
-0.27 |
-0.09 |
5.9 |
56 |
1 |
0 |
0 |
0 |
3 |
1 |
0 |
ABA 5 B ABA 51 B ABA 55 B
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5 |
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1.27 |
1.27 |
21.4 |
-0.21 |
-0.06 |
2.9 |
79 |
1 |
0 |
2 |
1 |
3 |
0 |
0 |
ABA 5 B ABA 51 B ABA 55 B
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6 |
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1.27 |
1.27 |
24.4 |
-0.12 |
0.00 |
2.9 |
76 |
1 |
0 |
2 |
1 |
3 |
0 |
0 |
ABA 5 B ABA 51 B ABA 55 B
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7 |
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1.27 |
1.27 |
25.5 |
-0.10 |
-0.02 |
2.8 |
72 |
1 |
0 |
2 |
1 |
4 |
0 |
0 |
ABA 5 B ABA 51 B ABA 55 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program