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PDBsum entry 1ydc

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Tunnel analysis for: 1ydc calculated with MOLE 2.0 PDB id
1ydc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.60 7.1 1.21 0.14 1.7 91 1 0 1 4 0 0 0  
2 1.58 12.6 0.87 0.09 9.7 91 0 2 0 4 0 0 0  
3 1.50 20.6 -0.01 -0.07 15.8 85 1 2 0 5 0 1 0  
4 1.42 5.0 0.45 0.84 5.5 59 1 0 0 1 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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