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PDBsum entry 1yau
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Tunnel analysis for: 1yau calculated with  MOLE 2.0
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PDB id
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1yau
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.47 |
3.34 |
17.1 |
-1.96 |
-0.43 |
20.1 |
78 |
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3 |
1 |
2 |
3 |
0 |
0 |
0 |
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2 |
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1.07 |
1.63 |
20.2 |
-1.93 |
-0.43 |
19.8 |
77 |
2 |
2 |
3 |
4 |
0 |
0 |
0 |
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3 |
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1.18 |
1.45 |
15.9 |
-1.66 |
-0.21 |
24.7 |
85 |
3 |
2 |
2 |
3 |
0 |
0 |
0 |
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4 |
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1.31 |
1.98 |
19.6 |
-2.41 |
-0.61 |
21.2 |
84 |
3 |
2 |
3 |
2 |
0 |
0 |
0 |
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5 |
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1.18 |
1.73 |
20.5 |
-1.87 |
-0.49 |
16.4 |
77 |
2 |
2 |
3 |
4 |
0 |
0 |
0 |
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6 |
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1.19 |
1.74 |
25.0 |
-1.36 |
-0.30 |
19.1 |
75 |
3 |
2 |
3 |
5 |
0 |
0 |
0 |
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7 |
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1.14 |
2.05 |
22.8 |
1.75 |
0.89 |
1.1 |
78 |
0 |
0 |
1 |
10 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program