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PDBsum entry 1y7w

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1y7w calculated with MOLE 2.0 PDB id
1y7w
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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25 tunnels, coloured by tunnel radius 19 tunnels, coloured by tunnel radius 19 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.65 23.0 0.00 0.17 9.6 89 2 0 3 3 1 1 0  
2 1.59 25.4 0.10 0.32 13.7 92 2 0 3 5 1 1 0  
3 1.68 25.8 -0.31 0.08 17.6 92 2 2 3 4 0 1 0  
4 1.73 26.5 -0.26 0.10 18.2 91 2 3 3 4 0 1 0  
5 1.73 28.6 -0.50 -0.02 19.0 93 2 3 3 4 0 0 0  
6 1.72 29.0 -0.31 0.12 19.2 93 2 3 3 4 0 0 0  
7 1.69 29.2 -0.30 0.06 18.1 93 2 3 3 4 0 0 0  
8 1.68 29.7 -0.31 0.13 20.1 93 2 3 3 4 0 0 0  
9 1.69 30.1 0.40 0.27 10.3 89 2 0 2 4 1 1 0  
10 1.66 30.8 0.62 0.37 9.9 90 2 0 2 5 1 1 0  
11 3.60 5.8 -2.64 -0.30 22.8 83 2 2 2 0 1 0 0  
12 3.02 7.4 -2.44 -0.33 24.9 83 2 2 1 0 1 0 0  
13 3.42 8.2 -2.36 -0.44 19.1 81 2 1 1 0 1 1 0  
14 2.20 8.5 -0.37 0.34 18.8 83 2 0 1 3 1 0 0  280 ACY B
15 3.03 11.0 -2.24 -0.41 22.4 84 2 1 2 0 1 1 0  
16 1.41 11.3 -2.09 -0.40 24.0 75 1 2 1 1 2 0 0  
17 1.35 13.3 -1.90 -0.39 21.7 75 1 2 1 1 2 0 0  
18 2.69 2.4 0.23 -0.29 2.5 87 0 0 0 2 0 1 0  
19 1.66 8.9 0.05 -0.01 5.1 85 0 1 3 3 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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