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PDBsum entry 1y7v

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1y7v calculated with MOLE 2.0 PDB id
1y7v
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 11 tunnels, coloured by tunnel radius 11 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.44 14.6 -0.24 -0.30 9.4 85 1 0 2 2 1 0 0  
2 1.43 17.2 -0.04 -0.28 7.0 87 2 0 2 4 1 0 0  
3 1.44 23.5 -0.67 -0.27 14.3 84 5 1 1 4 1 0 0  504 SO4 A
4 1.45 14.6 -0.27 -0.35 9.2 85 1 0 2 2 1 0 0  
5 1.45 17.0 -0.09 -0.27 7.7 87 2 0 2 4 1 0 0  
6 1.41 18.5 -1.17 0.07 10.8 70 0 2 4 1 5 0 1  507 INS A
7 1.44 16.9 -1.16 0.11 10.6 72 0 2 3 1 4 0 1  506 INS B
8 1.45 18.4 -1.06 0.15 9.2 70 0 2 3 1 5 0 1  506 INS B
9 1.70 12.7 0.67 0.10 3.4 76 1 0 2 6 1 0 0  
10 1.68 13.1 0.14 -0.04 14.5 74 1 3 0 3 0 1 0  
11 1.66 13.7 0.27 0.05 14.2 74 1 3 0 3 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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