spacer
spacer

PDBsum entry 1y7v

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 1y7v PDB id
1y7v
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 5018.62 1.91 68.30 2 10.92 3 14.46 1 15 10 19 13 10 15 2  
2 2629.55 0.00 67.95 3 10.10 6 8.18 9 13 5 8 18 7 4 0 SO4 500[B], SO4 505[B] (10 atoms)
3 2148.61 0.00 64.55 6 10.11 5 11.23 3 3 6 7 10 13 3 1 INS 507[A] (11 atoms)
4 2139.33 0.00 65.25 5 10.83 4 11.71 2 2 6 7 10 13 3 1 INS 506[B] (11 atoms)
5 2519.44 0.00 67.09 4 9.20 8 9.47 5 13 5 8 17 6 3 0 SO4 502[A] (5 atoms)
6 1932.19 0.00 61.68 10 10.08 7 8.82 8 10 1 8 10 3 3 0 SO4 504[A] (5 atoms)
7 1977.75 0.00 71.09 1 11.09 2 9.16 6 7 6 6 7 6 9 1 SO4 502[B] (5 atoms)
8 1197.70 0.00 61.88 9 11.59 1 10.50 4 7 1 4 4 2 2 0 SO4 501[B] (5 atoms)
9 1788.75 0.00 63.60 7 7.70 10 7.80 10 7 1 7 14 5 4 0  
10 1012.08 0.00 63.40 8 8.98 9 8.92 7 4 0 4 8 2 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer