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PDBsum entry 1y18
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Pore analysis for: 1y18 calculated with  MOLE 2.0
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PDB id
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1y18
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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27 pores,
coloured by radius |
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27 pores,
coloured by radius
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27 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.92 |
3.01 |
29.5 |
-1.82 |
-0.66 |
17.2 |
84 |
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2 |
2 |
3 |
1 |
0 |
2 |
0 |
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2 |
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1.80 |
1.97 |
41.5 |
-0.89 |
-0.41 |
13.8 |
90 |
4 |
0 |
7 |
1 |
1 |
1 |
1 |
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3 |
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2.46 |
3.53 |
62.4 |
-1.84 |
-0.48 |
20.9 |
80 |
7 |
6 |
3 |
3 |
2 |
4 |
0 |
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4 |
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2.17 |
3.02 |
63.1 |
-1.12 |
-0.63 |
9.9 |
90 |
4 |
2 |
5 |
3 |
0 |
1 |
0 |
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5 |
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2.26 |
2.61 |
63.1 |
-0.98 |
-0.47 |
13.0 |
81 |
3 |
3 |
3 |
3 |
0 |
3 |
0 |
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6 |
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2.70 |
3.52 |
65.5 |
-1.98 |
-0.44 |
23.2 |
82 |
8 |
5 |
3 |
2 |
2 |
3 |
0 |
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7 |
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1.74 |
3.15 |
66.0 |
-1.32 |
-0.49 |
13.3 |
89 |
6 |
1 |
10 |
5 |
1 |
1 |
2 |
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8 |
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2.51 |
2.51 |
66.1 |
-1.64 |
-0.53 |
17.1 |
83 |
6 |
4 |
6 |
4 |
2 |
2 |
0 |
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9 |
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2.15 |
3.01 |
77.2 |
-1.03 |
-0.61 |
10.0 |
90 |
4 |
3 |
5 |
3 |
0 |
1 |
0 |
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10 |
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2.48 |
3.39 |
80.9 |
-1.36 |
-0.47 |
17.9 |
81 |
9 |
6 |
3 |
5 |
3 |
3 |
0 |
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11 |
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2.51 |
3.40 |
84.7 |
-1.32 |
-0.52 |
15.6 |
83 |
8 |
4 |
6 |
6 |
3 |
1 |
0 |
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12 |
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2.52 |
2.52 |
86.0 |
-1.88 |
-0.50 |
19.4 |
83 |
10 |
5 |
8 |
2 |
6 |
3 |
0 |
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13 |
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2.27 |
2.60 |
87.9 |
-1.36 |
-0.40 |
17.3 |
81 |
9 |
6 |
4 |
5 |
2 |
3 |
0 |
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14 |
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2.39 |
3.71 |
90.8 |
-1.64 |
-0.59 |
22.1 |
84 |
9 |
8 |
3 |
4 |
0 |
4 |
0 |
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15 |
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2.38 |
4.68 |
94.3 |
-1.63 |
-0.62 |
19.2 |
88 |
6 |
4 |
8 |
3 |
1 |
3 |
0 |
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16 |
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2.81 |
3.01 |
94.5 |
-1.52 |
-0.64 |
18.5 |
87 |
8 |
6 |
6 |
5 |
0 |
2 |
0 |
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17 |
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2.39 |
4.67 |
94.3 |
-1.46 |
-0.41 |
17.1 |
85 |
7 |
3 |
8 |
3 |
3 |
2 |
0 |
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18 |
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2.27 |
2.61 |
95.8 |
-1.42 |
-0.55 |
18.7 |
84 |
9 |
7 |
3 |
6 |
0 |
4 |
0 |
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19 |
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2.26 |
2.90 |
97.9 |
-1.33 |
-0.67 |
13.6 |
88 |
6 |
4 |
8 |
5 |
0 |
2 |
0 |
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20 |
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2.23 |
3.41 |
99.0 |
-1.41 |
-0.65 |
15.3 |
86 |
8 |
6 |
6 |
4 |
0 |
4 |
0 |
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21 |
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2.19 |
3.04 |
103.9 |
-1.70 |
-0.54 |
17.1 |
84 |
8 |
6 |
7 |
5 |
2 |
4 |
0 |
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22 |
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2.15 |
3.21 |
108.8 |
-1.45 |
-0.55 |
14.9 |
84 |
10 |
5 |
7 |
3 |
3 |
3 |
0 |
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23 |
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2.49 |
3.38 |
110.0 |
-1.51 |
-0.48 |
20.0 |
81 |
12 |
8 |
4 |
7 |
3 |
3 |
0 |
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24 |
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2.55 |
3.36 |
112.0 |
-1.21 |
-0.43 |
14.8 |
82 |
10 |
6 |
9 |
8 |
6 |
3 |
0 |
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25 |
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1.73 |
1.87 |
122.8 |
-1.19 |
-0.38 |
14.9 |
83 |
13 |
5 |
11 |
5 |
7 |
4 |
1 |
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26 |
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2.60 |
2.60 |
128.1 |
-1.31 |
-0.47 |
16.9 |
84 |
9 |
9 |
9 |
9 |
3 |
4 |
0 |
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27 |
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1.77 |
1.89 |
138.3 |
-1.19 |
-0.40 |
16.9 |
83 |
12 |
9 |
11 |
9 |
4 |
5 |
1 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program