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Ligand clusters for UniProt code P15587

Ligand clusters for P15587: Xylose isomerase OS=Streptomyces olivochromogenes GN=xylA PE=1 SV=3

4 ligand clusters
Cluster 1.
6 ligand types
12 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 1s5mA  
 

Structures

PDB   Schematic diagram
1s5mA    
2gyiA    
1xycA    
1xybA    

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: GLC × 1
Alpha-D-Glucose
PDB code: 1s5m(A).


 
2. Ligand: GLO × 1
D-Glucose in linear form
PDB code: 1xyb(A).


 
3. Ligand: 3MF × 1
3-O-Methylfructose in linear form
PDB code: 1xyc(A).


 
4. Ligand: HYA × 1
2,3,4,N-Tetrahydroxy-Butyrimidic acid
PDB code: 2gyi(A).

_Mg
 
5. Metal: _MG × 6
PDB codes: 1xyb(A), 1xyc(A), 2gyi(A),

_Mn
 
6. Metal: _MN × 2
PDB codes: 1s5m(A),

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: GLO × 1
D-Glucose in linear form
PDB code: 1xyb(A).


 
2. Ligand: 3MF × 1
3-O-Methylfructose in linear form
PDB code: 1xyc(A).


 
3. Ligand: HYA × 1
2,3,4,N-Tetrahydroxy-Butyrimidic acid
PDB code: 2gyi(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 1s5m(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 1s5m(A).

 

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