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PDBsum entry 1xxi

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1xxi calculated with MOLE 2.0 PDB id
1xxi
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.08 3.24 26.4 -2.72 -0.78 27.8 86 3 3 2 2 0 0 0  
2 2.35 5.78 35.2 -1.27 -0.33 25.4 82 5 4 3 4 1 1 0  
3 2.94 4.81 86.4 -1.58 -0.49 23.7 83 10 12 9 11 0 0 0  
4 1.29 1.75 95.6 -1.69 -0.30 20.8 82 8 7 2 5 2 3 0  
5 1.36 1.79 104.5 -2.03 -0.59 20.0 82 6 10 8 4 3 4 0  
6 2.66 2.87 106.1 -2.16 -0.48 28.5 86 11 10 6 7 1 3 0  
7 1.26 1.73 131.0 -1.85 -0.51 21.9 83 7 14 10 10 3 4 0  
8 1.46 1.64 133.1 -0.70 -0.19 15.0 81 11 8 8 12 3 3 1  
9 1.46 1.65 134.0 -0.75 -0.17 14.8 80 10 6 10 12 3 4 1  
10 1.97 5.23 157.3 -1.99 -0.39 26.9 86 16 13 7 10 2 4 0  
11 1.44 1.93 196.2 -1.14 -0.28 15.8 81 11 11 11 13 6 7 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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