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PDBsum entry 1xxh

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Pore analysis for: 1xxh calculated with MOLE 2.0 PDB id
1xxh
Pores calculated on whole structure Pores calculated excluding ligands

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28 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.61 45.7 -0.99 -0.10 19.5 83 6 2 4 7 1 1 0  AGS 804 G
2 1.64 2.49 51.8 -2.15 -0.33 17.9 85 5 2 7 3 2 0 0  
3 1.33 1.66 52.9 -0.21 0.07 14.1 77 6 2 3 12 2 1 0  AGS 804 G
4 1.32 1.90 60.4 -0.76 -0.17 14.9 80 5 4 5 6 2 2 0  
5 1.36 1.65 75.2 -1.09 -0.15 18.1 79 8 5 6 7 3 3 0  AGS 804 G
6 1.34 2.05 92.5 -2.23 -0.55 27.7 85 11 10 4 7 1 2 0  
7 1.50 2.39 98.1 -1.81 -0.58 28.4 86 13 13 2 9 0 1 0  
8 1.33 2.04 101.1 -1.92 -0.32 20.7 79 10 9 4 8 5 4 0  MSE 301 E
9 2.17 2.13 102.0 -1.86 -0.34 23.0 81 14 9 4 9 5 3 0  MSE 301 E
10 1.33 2.03 104.0 -1.87 -0.51 23.9 82 10 13 2 8 2 2 0  
11 1.49 3.42 106.0 -1.88 -0.43 21.4 82 8 8 6 5 4 2 0  MSE 285 F
12 1.16 1.21 112.0 -1.88 -0.40 24.5 82 11 9 6 6 2 2 0  
13 1.77 3.75 122.0 -1.39 -0.25 19.3 79 9 8 10 10 3 3 0  
14 1.38 1.97 126.6 -1.11 -0.31 17.5 82 9 8 13 12 1 1 0  
15 1.69 2.52 126.2 -2.11 -0.43 25.6 82 12 13 8 9 4 4 0  
16 1.33 2.02 128.1 -1.87 -0.48 21.9 82 10 10 9 8 3 1 0  
17 1.77 2.44 129.0 -1.95 -0.33 23.2 79 11 12 8 10 7 5 0  MSE 301 E
18 1.16 1.21 132.2 -1.88 -0.46 24.7 84 14 10 10 10 1 2 0  AGS 804 G
19 1.30 1.61 134.8 -1.51 -0.35 20.9 82 12 9 14 13 2 2 0  AGS 804 G
20 1.26 1.46 134.2 -1.96 -0.36 23.1 77 10 12 10 7 8 4 0  MSE 301 E
21 1.46 2.36 135.8 -1.94 -0.45 24.4 81 11 16 7 10 4 4 0  
22 1.33 2.01 136.9 -1.95 -0.40 25.5 81 11 10 9 9 4 1 0  
23 2.31 2.42 138.2 -1.72 -0.35 19.9 76 11 11 6 11 6 10 0  MSE 301 J
24 1.28 2.01 139.5 -1.98 -0.42 26.9 84 9 13 5 12 2 2 0  
25 3.56 3.89 140.5 -2.03 -0.42 25.8 82 15 12 12 9 6 3 0  
26 2.19 2.20 143.2 -1.92 -0.32 22.8 78 13 11 12 10 9 4 0  MSE 301 E
27 1.46 2.35 150.1 -1.82 -0.44 24.2 80 13 16 11 10 6 3 0  
28 1.19 1.21 161.9 -1.97 -0.45 25.5 86 16 12 14 8 1 1 0  
29 2.40 3.84 188.0 -1.83 -0.41 22.1 80 16 14 14 13 5 10 0  MSE 301 J
30 2.05 2.25 201.6 -1.89 -0.48 24.3 85 15 16 13 12 3 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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