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PDBsum entry 1xsl
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Tunnel analysis for: 1xsl calculated with  MOLE 2.0
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PDB id
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1xsl
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
1.35 |
29.4 |
-0.81 |
-0.51 |
9.3 |
83 |
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1 |
1 |
2 |
3 |
1 |
0 |
0 |
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DC 7 N DG 8 N DC 9 N DA 10 N DC 11 N DG 3 O DC 4
O DG 5 O DC 6 O
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2 |
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1.29 |
1.28 |
31.0 |
-1.73 |
-0.72 |
21.6 |
91 |
3 |
2 |
3 |
2 |
0 |
0 |
0 |
DG 6 N DC 7 N DG 8 N DG 5 O
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3 |
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1.29 |
1.29 |
33.5 |
-1.73 |
-0.68 |
20.6 |
92 |
3 |
2 |
4 |
2 |
0 |
0 |
0 |
DG 3 N DG 6 N DC 7 N DG 8 N DG 5 O
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4 |
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1.29 |
1.29 |
37.8 |
-1.28 |
-0.47 |
18.0 |
92 |
2 |
2 |
5 |
1 |
0 |
1 |
0 |
DG 8 B DC 9 B DA 10 B DC 11 B DG 6 N DC 7 N DG 8
N DG 5 O
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5 |
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1.29 |
1.29 |
39.8 |
-1.31 |
-0.66 |
16.1 |
85 |
2 |
2 |
3 |
2 |
1 |
0 |
0 |
DG 3 N DG 6 N DC 7 N DG 8 N DG 5 O
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6 |
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1.29 |
1.29 |
43.0 |
-1.76 |
-0.64 |
17.5 |
77 |
3 |
2 |
2 |
0 |
1 |
1 |
0 |
DC 7 B DG 8 B DT 2 C DG 3 C DC 4 C DG 6 N DC 7 N
DG 8 N DG 5 O
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7 |
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1.29 |
1.29 |
46.5 |
-1.85 |
-0.72 |
19.0 |
85 |
4 |
2 |
3 |
0 |
0 |
1 |
0 |
DG 3 B DG 6 B DC 7 B DG 8 B DG 6 N DC 7 N DG 8 N
DG 5 O
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8 |
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1.28 |
1.28 |
49.8 |
-1.28 |
-0.58 |
17.9 |
88 |
3 |
3 |
4 |
1 |
0 |
1 |
0 |
DC 7 B DG 8 B DG 6 N DC 7 N DG 8 N DC 9 N DA 10 N
DC 11 N DG 5 O
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9 |
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1.28 |
1.28 |
50.6 |
-1.17 |
-0.58 |
16.4 |
91 |
5 |
2 |
4 |
2 |
0 |
1 |
0 |
DG 6 B DC 7 B DG 8 B DG 6 N DC 7 N DG 8 N DG 5 O
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program