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PDBsum entry 1xpu

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1xpu calculated with MOLE 2.0 PDB id
1xpu
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.98 3.03 27.0 -0.59 -0.36 12.4 86 4 3 3 3 0 0 0  C 2 M
2 1.22 3.21 28.2 0.66 0.25 13.5 78 3 2 1 8 1 0 0  
3 1.85 2.19 31.5 -2.06 -0.02 30.5 75 6 3 0 1 2 0 0  AGS 6600 E
4 2.07 4.67 41.3 -1.77 -0.34 21.1 80 4 3 4 3 1 0 0  AGS 3600 C
5 2.35 2.47 88.7 -2.38 -0.37 31.2 75 14 9 0 2 4 0 0  FPD 5701 E AGS 6600 E FPD 6701 F
6 2.30 2.47 92.2 -1.54 -0.34 26.6 74 10 6 0 5 3 0 0  AGS 3600 C FPD 3701 C C 2 M
7 1.65 2.34 115.9 -1.75 -0.37 26.1 80 16 10 3 8 2 1 0  AGS 5600 E FPD 5701 E
8 1.52 1.58 151.5 -1.46 -0.36 23.6 76 13 6 0 9 3 0 0  AGS 6600 E FPD 6701 F C 2 M
9 1.49 1.56 154.7 -1.69 -0.36 26.4 74 13 8 1 9 2 0 0  AGS 5600 E FPD 5701 E C 2 M
10 1.65 2.31 163.1 -1.71 -0.40 24.6 81 18 12 3 10 4 1 0  AGS 6600 E FPD 6701 F
11 1.94 1.93 170.7 -2.16 -0.39 30.5 76 19 12 1 9 6 0 0  AGS 3600 C FPD 3701 C AGS 6600 E FPD 6701 F
12 1.71 2.39 171.1 -0.96 -0.42 16.4 84 11 8 5 14 1 0 0  C 2 M
13 1.83 1.84 173.9 -2.38 -0.41 32.9 75 19 14 2 9 5 0 0  AGS 3600 C FPD 3701 C AGS 5600 E FPD 5701 E
14 1.92 2.48 190.3 -1.68 -0.46 23.7 82 17 14 6 14 4 0 0  AGS 3600 C FPD 3701 C
15 0.90 0.91 243.6 -1.35 -0.42 18.2 85 21 14 13 17 2 4 0  C 2 L
16 0.85 0.87 342.1 -1.61 -0.39 20.1 81 22 18 15 13 5 4 0  AGS 5600 E FPD 5701 E C 2 L

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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