PDBsum entry 1xfy Go to PDB code:  Pore analysis for: 1xfy calculated with MOLE 2.0 PDB id 1xfy Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   35 pores, coloured by radius 40 pores, coloured by radius 40 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 3.53 28.7 -2.19 -0.70 24.5 86 1 5 3 1 0 2 0   2 2.02 2.23 34.5 -1.86 -0.61 22.7 85 7 3 3 2 1 0 0   3 1.80 1.89 35.6 -2.33 -0.67 29.9 77 3 5 1 1 1 1 0   4 2.04 2.24 39.1 -1.98 -0.75 21.2 82 5 7 3 1 0 1 0   5 2.01 2.23 39.5 -1.98 -0.56 22.1 81 6 3 2 2 3 0 0   6 1.81 2.52 60.8 -2.20 -0.49 26.9 79 7 4 3 2 2 2 0   7 1.56 1.69 69.0 -1.95 -0.55 25.9 80 6 9 4 1 2 1 0   8 1.56 1.68 81.2 -1.63 -0.63 20.2 85 6 10 5 2 0 1 0   9 1.28 3.10 97.6 -1.75 -0.41 19.6 81 10 4 5 4 3 3 0   10 1.90 3.47 141.5 -2.75 -0.55 33.9 78 12 14 7 3 3 1 0   11 2.01 3.57 153.6 -2.29 -0.60 27.7 81 12 15 8 4 1 1 0   12 1.43 2.37 215.7 -2.23 -0.50 28.7 82 18 17 12 5 3 3 0   13 1.53 1.84 225.0 -2.10 -0.46 27.6 82 20 16 11 7 3 4 0   14 2.02 2.23 41.9 -2.15 -0.80 23.6 84 3 8 2 1 0 1 0   15 2.02 2.23 44.9 -1.81 -0.56 23.2 87 5 4 3 3 1 0 0   16 1.20 1.21 51.3 -1.48 -0.23 17.9 80 6 4 4 1 5 1 0   17 1.21 1.20 52.3 -1.50 -0.17 19.2 75 5 4 1 1 5 1 0   18 1.56 1.65 54.3 -1.43 -0.52 19.8 84 3 6 2 2 0 2 0   19 1.28 2.27 60.5 -0.80 -0.23 17.1 86 5 3 3 6 3 0 0   20 1.27 2.36 69.3 -1.64 -0.40 19.8 84 9 4 5 3 4 0 0   21 1.26 2.24 78.8 -1.02 -0.29 20.3 79 8 6 2 7 3 2 0   22 1.88 2.64 79.1 -2.26 -0.61 24.8 82 9 6 5 2 2 0 0   23 2.05 3.55 128.5 -2.60 -0.49 33.0 80 9 11 5 4 1 2 0   24 2.20 2.55 25.2 -0.77 -0.50 17.9 87 2 4 2 3 0 0 0   25 1.80 2.47 30.4 -1.94 -0.49 25.7 75 5 1 1 0 2 0 0   26 2.03 2.24 34.5 -1.85 -0.61 22.1 85 7 3 3 2 1 0 0   27 2.04 2.24 39.0 -2.04 -0.75 22.1 82 5 7 3 1 0 1 0   28 1.83 2.50 42.8 -1.85 -0.47 27.5 76 6 3 1 1 2 0 0   29 1.32 2.41 49.9 -1.69 -0.49 22.8 87 5 4 3 2 1 0 0   30 1.81 2.57 56.4 -1.73 -0.36 22.5 78 8 2 2 2 2 2 0   31 1.57 1.67 59.6 -1.29 -0.47 19.6 83 3 7 2 2 0 2 0   32 1.82 2.54 60.7 -2.27 -0.50 27.0 79 7 4 3 2 2 2 0   33 1.59 1.67 61.1 -1.95 -0.58 26.3 83 6 9 4 1 0 1 0   34 1.59 1.70 66.8 -1.59 -0.46 22.5 80 8 6 3 2 1 1 0   35 2.01 3.51 133.3 -2.34 -0.47 30.6 80 9 13 5 4 1 2 0   36 1.34 1.46 26.2 -0.93 -0.12 17.1 79 3 3 1 2 2 0 0   37 1.15 2.87 27.2 -0.01 -0.02 11.4 76 2 3 1 4 3 0 0   38 2.03 2.17 26.5 -1.21 -0.10 17.5 86 4 0 4 4 1 1 0   39 1.33 1.47 26.1 -0.93 -0.12 17.1 79 3 3 1 2 2 0 0   40 1.18 2.75 66.1 -0.89 -0.09 19.6 79 6 5 4 6 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.