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PDBsum entry 1xfu

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Pore analysis for: 1xfu calculated with MOLE 2.0 PDB id
1xfu
Pores calculated on whole structure Pores calculated excluding ligands

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31 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.49 29.2 -1.67 -0.40 24.1 81 4 4 2 1 1 0 0  
2 3.56 3.77 50.7 -2.07 -0.62 29.4 82 5 6 2 1 1 2 0  
3 1.82 1.92 101.3 -2.11 -0.58 20.3 89 7 7 10 4 1 1 0  
4 1.87 2.62 124.0 -2.04 -0.39 28.4 82 10 13 8 4 1 2 0  
5 2.39 2.57 132.5 -2.58 -0.71 25.3 83 7 13 6 0 0 3 0  
6 2.37 3.46 154.0 -2.56 -0.70 26.7 83 10 14 7 0 1 3 0  
7 1.17 2.16 28.1 0.70 0.14 12.2 82 2 1 2 5 0 0 0  
8 1.13 1.57 64.9 -1.78 -0.62 19.6 81 7 4 5 4 1 1 0  
9 1.13 1.57 68.1 -2.25 -0.64 24.1 76 9 5 4 2 1 1 0  
10 1.03 1.03 69.1 -0.57 -0.37 13.7 87 3 5 3 6 0 1 0  
11 1.31 2.38 81.1 -2.30 -0.38 28.2 81 8 6 6 5 1 1 0  
12 1.22 1.22 93.7 -1.26 -0.38 17.9 84 7 6 4 4 2 1 0  
13 1.33 1.48 99.6 -2.16 -0.66 25.9 81 9 11 4 2 0 3 0  
14 1.73 2.62 113.8 -2.04 -0.36 29.2 82 11 11 8 4 1 1 0  
15 1.24 1.79 119.6 -2.30 -0.67 27.0 81 10 11 5 1 0 2 0  
16 1.18 2.34 280.1 -1.79 -0.40 22.2 82 17 16 14 12 6 4 0  
17 1.75 2.63 40.4 -1.39 -0.58 20.9 89 3 4 3 3 0 0 0  
18 1.78 1.89 43.5 -1.91 -0.56 19.4 89 7 4 7 3 1 0 0  
19 3.56 3.77 50.6 -2.06 -0.62 29.4 82 5 6 2 1 1 2 0  
20 1.22 1.25 58.8 -0.51 -0.34 15.3 86 2 5 1 6 0 1 0  
21 1.87 1.97 61.9 -2.28 -0.63 28.9 81 4 7 3 1 1 2 0  
22 2.05 2.09 80.9 -2.36 -0.42 28.7 82 8 7 6 5 1 1 0  
23 2.14 2.80 86.6 -1.93 -0.27 28.1 82 9 7 7 4 1 1 0  
24 1.26 1.35 94.3 -1.21 -0.46 19.3 84 4 8 3 6 1 1 0  
25 1.74 2.64 100.0 -2.17 -0.39 28.5 81 10 10 7 4 1 1 0  
26 1.21 1.22 108.1 -2.01 -0.53 25.5 82 8 11 4 4 2 2 0  
27 1.22 1.25 121.1 -1.79 -0.51 20.2 85 11 8 8 6 3 1 0  
28 1.30 1.34 167.9 -1.95 -0.51 20.8 83 14 8 9 6 4 2 0  
29 1.17 2.16 26.1 0.79 0.21 12.8 82 2 1 2 5 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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