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PDBsum entry 1xf5
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Tunnel analysis for: 1xf5 calculated with  MOLE 2.0
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PDB id
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1xf5
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.57 |
1.87 |
16.1 |
-1.38 |
-0.75 |
13.3 |
97 |
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1 |
2 |
4 |
1 |
0 |
1 |
0 |
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2 |
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1.27 |
1.27 |
16.8 |
0.08 |
-0.44 |
2.1 |
99 |
0 |
0 |
3 |
1 |
0 |
0 |
0 |
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3 |
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1.27 |
1.27 |
17.8 |
0.65 |
-0.21 |
1.9 |
96 |
0 |
0 |
2 |
2 |
0 |
0 |
0 |
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4 |
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1.40 |
2.41 |
18.5 |
-0.33 |
-0.37 |
7.7 |
93 |
1 |
0 |
4 |
2 |
0 |
0 |
0 |
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5 |
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1.40 |
2.42 |
19.4 |
-0.05 |
-0.23 |
8.2 |
91 |
1 |
0 |
3 |
3 |
0 |
0 |
0 |
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6 |
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1.27 |
1.27 |
19.7 |
-0.16 |
-0.56 |
2.0 |
95 |
0 |
0 |
4 |
1 |
1 |
0 |
0 |
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7 |
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1.40 |
2.42 |
21.4 |
-0.59 |
-0.50 |
7.5 |
92 |
1 |
0 |
5 |
2 |
1 |
0 |
0 |
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8 |
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1.41 |
1.56 |
16.9 |
0.10 |
-0.40 |
2.0 |
98 |
0 |
0 |
3 |
2 |
0 |
0 |
0 |
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9 |
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1.41 |
1.40 |
15.2 |
-0.56 |
-0.12 |
7.3 |
75 |
2 |
1 |
2 |
3 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program