PDBsum entry 1xef

Pore analysis for: 1xef calculated with

MOLE 2.0

PDB id

1xef

Pores calculated on whole structure

Pores calculated excluding ligands

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11 pores, coloured by radius

14 pores, coloured by radius

14 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.50

2.78

26.4

-0.18

-0.03

12.0

77

2

2

2

3

1

1

0

ATP 3800 D

2

2.71

2.82

37.8

-0.73

-0.14

12.7

75

3

2

3

3

2

1

0

ATP 800 A

3

1.47

2.13

45.7

-1.97

-0.23

24.5

80

5

4

4

3

2

0

0

4

2.10

3.20

47.5

-1.38

-0.19

28.0

86

6

6

3

5

2

1

0

5

2.57

3.04

57.6

-0.91

-0.11

17.0

78

6

3

2

3

1

1

0

ATP 2800 C

6

2.60

3.03

59.7

-1.12

-0.34

15.9

78

4

4

4

6

2

1

0

ATP 2800 C

7

2.62

2.98

60.9

-0.96

-0.15

13.4

79

3

1

5

4

3

1

0

ATP 2800 C

8

2.53

3.23

66.1

-1.94

-0.40

30.4

83

7

4

4

3

2

2

0

9

1.29

3.39

67.0

-1.32

0.01

22.7

79

9

5

3

8

4

1

0

10

2.04

2.09

75.1

-0.43

-0.03

12.7

77

5

3

7

9

3

1

0

ATP 3800 D

11

2.83

2.83

82.0

-1.24

-0.20

20.3

73

7

5

2

5

4

0

0

ATP 2800 C

12

2.12

2.15

83.1

-1.03

-0.24

14.7

75

6

4

5

9

4

2

0

ATP 2800 C ATP 3800 D

13

1.55

1.72

83.5

-1.23

0.12

19.4

79

9

5

3

8

4

0

0

14

2.47

2.58

105.7

-1.66

-0.30

25.2

80

8

5

6

5

5

2

0

ATP 2800 C

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.