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PDBsum entry 1xd2

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1xd2 calculated with MOLE 2.0 PDB id
1xd2
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.85 2.53 28.8 -0.97 0.02 12.3 81 4 3 4 3 3 0 0  
2 2.27 2.64 29.0 -0.83 0.00 10.7 82 4 2 4 3 3 0 0  
3 1.52 1.63 29.2 -0.97 -0.30 18.9 82 2 4 2 2 1 0 0  
4 1.45 1.89 73.1 -1.73 -0.48 22.5 80 8 8 4 5 2 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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