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PDBsum entry 1wpq

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Top Page protein ligands Protein-protein interface(s) links
Protein chain A    -    representing identical chain: B PDB id
1wpq
Protein chain A highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
3 sheets
3 beta alpha beta units
3 beta hairpins
3 beta bulges
12 strands
19 helices
39 helix-helix interacs
16 beta turns
3 gamma turns
Catalytic residues
K204-T264
G201
Variants
Met144Thr
Ile54Val
Val197Ala
Gly121Arg
Glu124Lys
Ile284Val
Val79Gly
  
Chain & (348 residues)

UniProt code: P21695 (GPDA_HUMAN)   [Pfam]   [Ensembl gene]

structural classification (2 domains) :
Domain Links CATH no.   Class Architecture
1 3.40.50.720 = Alpha Beta 3-Layer(aba) Sandwich
2 1.10.1040.10 = Mainly Alpha Orthogonal Bundle

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
CSA annotation:   
    catalytic residue
Human variant:   
    variant residue
Residue contacts:   
    to ligand
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6  AC7  AC8  AC9  BC1
 BC2

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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