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PDBsum entry 1wpq

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1wpq calculated with MOLE 2.0 PDB id
1wpq
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.03 19.7 -1.01 -0.20 14.0 84 4 0 3 3 1 0 0  2001 13P B,3002 NAD B
2 2.33 20.1 -0.69 -0.06 8.8 68 2 1 1 2 4 1 0  3002 NAD B
3 1.60 29.9 -0.26 0.10 7.0 63 2 0 2 2 5 1 0  3002 NAD B
4 1.37 9.5 -0.68 -0.33 7.7 77 0 1 1 1 1 1 1  
5 1.80 12.6 0.22 -0.12 9.1 83 0 1 2 2 1 0 1  
6 1.28 14.0 0.09 -0.04 12.2 83 2 1 1 2 1 0 1  1001 SO4 A
7 1.83 10.7 -0.66 -0.39 17.8 92 1 1 0 3 0 1 0  
8 1.72 3.7 -3.24 -0.62 40.8 80 2 1 0 0 0 0 0  
9 1.71 6.3 -1.48 -0.58 20.0 82 2 1 0 1 0 0 1  
10 1.94 9.2 -1.50 -0.62 20.3 81 2 2 0 1 0 0 1  
11 1.89 9.9 -2.34 -0.69 28.0 85 2 2 0 0 0 0 0  
12 1.71 8.7 -1.52 -0.75 17.7 89 2 1 1 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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