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Ligand clusters for UniProt code P00690

Ligand clusters for P00690: Pancreatic alpha-amylase OS=Sus scrofa GN=AMY2 PE=1 SV=3

Top 6 (of 20) ligand clusters
Cluster 1.
12 ligand types
14 ligands
Cluster 2.
6 ligand types
6 ligands
Cluster 3.
5 ligand types
6 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
3 ligand types
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1bvnP  
 

Structures

PDB   Schematic diagram
1bvnP    
3l2lA    
3l2mA    
1kxqA    
1wo2A    
 more ...

 

 Cluster 1 contains 12 ligand types

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Ligand Description


 
1. Ligand: MLR × 1
Maltotriose
PDB code: 1ua3(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 1wo2(A).


 
3. Ligand: NPO × 1
P-Nitrophenol
PDB code: 1vah(A).


 
4. Ligand: GLC-GLC-GLC-GLC-GLC-GLC × 3
GLC=Alpha-D-Glucose.
PDB codes: 3l2l(A), 3l2m(A),


 
5. Ligand: AC1-GLC-AC1-BGC × 1
AC1=6-Methyl-5-(4,5,6-Trihydroxy-3-Hydroxymethyl-Cyclohex- 2-Enylamino)-Tetrahydro-Pyran-2,3,4-Triol, GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB code: 1ose(A).


 
6. Ligand: AGL-GLC-HMC-AGL-GLC-BGC × 1
AGL=4,6-Dideoxy-4-Amino-Alpha-D-Glucose, GLC=Alpha-D-Glucose, HMC=5-Hydroxymethyl-Chonduritol, BGC=Beta-D-Glucose.
PDB code: 1pig(A).


 
7. Ligand: GLC-AC1-AC1-GLC-BGC × 1
GLC=Alpha-D-Glucose, AC1=6-Methyl-5-(4,5,6-Trihydroxy-3-Hydroxymethyl-Cyclohex- 2-Enylamino)-Tetrahydro-Pyran-2,3,4-Triol, BGC=Beta-D-Glucose.
PDB code: 1hx0(A).


 
8. Ligand: GLC-GLC-BGC × 1
GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB code: 1wo2(A).


 
9. Ligand: GLC-GLC-DAF-BGC × 1
GLC=Alpha-D-Glucose, DAF=1,4-Deoxy-4-((5-Hydroxymethyl-2,3,4-Trihydroxycyclohex- 5-Enyl)amino)fructose, BGC=Beta-D-Glucose.
PDB code: 1ppi(A).


 
10. Ligand: GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 3l2l(A).


 
11. Ligand: GLC-MA1 × 1
GLC=Alpha-D-Glucose, MA1=1,4-Dithio-Alpha-D-Glucopyranose.
PDB code: 1jfh(A).


 
12. Ligand: MA2-MA3 × 1
MA2=4-S-Methyl-4-Thio-Alpha-D-Glucopyranose, MA3=O1-Methyl-4-Deoxy-4-Thio-Alpha-D-Glucose.
PDB code: 1jfh(A).

 

 Cluster 2 contains 6 ligand types

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Ligand Description


 
1. Ligand: MAL × 1
Maltose
PDB code: 1hx0(A).


 
2. Ligand: MLR × 1
Maltotriose
PDB code: 1ua3(A).


 
3. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 1hx0(A).


 
4. Ligand: BGC × 1
Beta-D-Glucose
PDB code: 1ose(A).


 
5. Ligand: BGC-GLC × 1
GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB code: 1pig(A).


 
6. Ligand: GLC-GLC-BGC × 1
GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB code: 1wo2(A).

 

 Cluster 3 contains 5 ligand types

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Ligand Description


 
1. Ligand: MAL × 1
Maltose
PDB code: 1ua3(A).


 
2. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 1hx0(A),


 
3. Ligand: GLC-BGC × 1
GLC=Alpha-D-Glucose, BGC=Beta-D-Glucose.
PDB code: 1wo2(A).


 
4. Ligand: GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 1pig(A).


 
5. Ligand: GLC-MA1 × 1
GLC=Alpha-D-Glucose, MA1=1,4-Dithio-Alpha-D-Glucopyranose.
PDB code: 1jfh(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO-EDO × 1
EDO=1,2-Ethanediol.
PDB code: 1ua3(A).


 
2. Ligand: GLC-GLC-GLC-GLC-GLC-GLC × 1
GLC=Alpha-D-Glucose.
PDB code: 3l2m(A).

 

 Cluster 5 contains 3 ligand types

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Ligand Description

_Cl
 
1. Metal: _CL × 2
PDB codes: 1hx0(A), 1ua3(A).


 
2. Ligand: BGC × 1
Beta-D-Glucose
PDB code: 1ua3(A).


 
3. Ligand: GLC × 1
Alpha-D-Glucose
PDB code: 3l2l(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: BGC × 1
Beta-D-Glucose
PDB code: 1pig(A).

 

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