PDBsum entry 1wmk Go to PDB code:  Pore analysis for: 1wmk calculated with MOLE 2.0 PDB id 1wmk Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   36 pores, coloured by radius 36 pores, coloured by radius 36 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.46 1.60 26.0 -1.92 -0.70 14.7 80 2 2 2 1 1 1 0   2 2.61 3.83 28.6 -2.54 -0.55 30.4 84 5 4 2 2 1 0 0   3 1.47 1.62 34.4 -1.58 -0.53 13.5 85 2 3 2 2 0 1 0   4 1.47 2.76 41.2 -1.99 -0.40 19.1 75 6 3 4 2 4 1 0   5 1.47 2.75 44.5 -1.71 -0.47 23.1 78 4 6 3 3 3 0 0   6 1.31 1.53 44.6 -2.16 -0.50 25.9 80 5 7 3 2 1 2 0   7 1.30 1.42 45.1 -1.58 -0.40 25.4 83 4 6 2 4 1 1 0   8 2.26 3.33 46.9 -2.89 -0.71 27.3 83 5 5 5 0 1 0 0   9 1.32 1.53 49.8 -1.69 -0.34 26.1 81 7 8 2 5 2 1 0   10 1.61 2.43 52.5 -1.39 -0.38 22.1 77 4 5 4 3 3 0 0   11 3.18 4.57 52.4 -2.46 -0.54 29.8 82 9 7 4 3 1 1 0   12 2.26 3.36 54.4 -2.34 -0.60 20.8 82 7 4 5 1 1 1 0   13 1.32 2.54 72.0 -1.94 -0.42 23.8 76 8 7 6 5 7 0 0   14 2.62 3.74 72.2 -2.17 -0.57 25.6 86 9 7 8 2 1 1 0   15 1.47 2.45 74.3 -1.61 -0.36 19.5 81 8 7 7 4 4 2 0   16 1.46 2.46 79.5 -2.35 -0.62 28.5 81 10 9 8 2 3 0 0   17 1.98 2.49 80.9 -2.97 -0.75 32.6 87 5 8 6 0 1 0 0   18 1.32 2.52 91.5 -2.41 -0.50 27.1 78 10 10 9 3 5 1 0   19 1.47 2.75 91.5 -1.91 -0.35 20.9 83 9 5 7 5 3 2 0   20 2.57 3.76 97.0 -2.06 -0.48 24.3 85 12 8 7 4 1 2 0   21 1.77 2.44 97.7 -2.25 -0.55 27.1 81 12 8 7 3 3 1 0   22 1.49 2.75 97.9 -2.16 -0.44 19.9 82 9 5 10 3 3 1 0   23 1.65 2.44 113.4 -1.96 -0.46 29.3 79 11 12 4 5 5 0 0   24 1.30 2.59 33.8 -1.83 -0.30 19.4 78 4 3 4 1 2 1 0   25 2.05 3.70 36.5 -1.71 -0.20 27.7 83 5 2 1 3 1 0 0   26 1.31 2.59 37.3 -1.55 -0.46 22.9 79 3 6 3 3 2 0 0   27 1.30 2.59 38.2 -2.03 -0.41 19.4 76 5 3 4 1 3 1 0   28 1.31 2.58 46.0 -2.11 -0.44 22.4 78 5 4 4 1 2 1 0   29 1.15 1.15 57.2 -1.30 -0.27 18.1 77 6 2 3 2 2 1 0   30 1.15 1.17 68.8 -1.46 -0.34 18.6 75 6 5 5 3 4 1 0   31 1.31 1.87 70.3 -1.32 -0.25 19.6 80 6 5 4 3 3 2 0   32 1.45 1.65 70.7 -2.08 -0.60 21.3 84 7 4 6 3 1 0 0   33 1.15 1.19 72.1 -0.77 -0.26 15.9 78 5 5 3 4 2 1 0   34 1.32 2.59 73.9 -1.67 -0.33 23.3 78 5 7 6 4 5 0 0   35 1.34 1.87 82.1 -1.52 -0.37 20.1 78 8 6 4 3 4 2 0   36 1.18 1.17 83.7 -1.65 -0.43 17.9 76 8 5 4 3 3 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.