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PDBsum entry 1wcq

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1wcq calculated with MOLE 2.0 PDB id
1wcq
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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38 tunnels, coloured by tunnel radius 28 tunnels, coloured by tunnel radius 28 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.49 23.0 -1.18 -0.23 4.6 83 1 0 3 3 2 0 0  
2 1.64 23.3 -0.66 -0.45 9.1 83 1 2 1 3 2 0 0  
3 1.34 26.1 -0.86 -0.32 9.5 81 3 1 2 2 2 1 0  
4 1.48 29.5 -1.15 -0.33 5.9 82 1 0 4 4 2 2 0  
5 1.49 33.1 -1.97 -0.44 16.4 85 3 3 3 4 2 2 0  
6 1.49 34.9 -2.18 -0.44 17.2 84 3 1 3 3 2 2 0  
7 1.68 38.3 -0.86 -0.38 12.6 90 2 2 7 4 2 0 0  
8 1.40 28.9 -1.42 -0.43 18.2 85 2 2 2 4 0 3 0  
9 1.38 30.4 -1.10 -0.39 15.3 85 3 2 2 4 1 1 0  
10 2.04 10.3 0.18 -0.06 16.3 86 0 2 1 3 2 0 0  1652 DAN B
11 2.32 14.1 -0.10 0.12 21.1 82 1 3 1 3 3 0 0  1652 DAN B
12 1.97 9.7 -0.33 -0.29 18.7 91 0 2 1 3 1 0 0  1651 DAN A
13 2.26 15.0 -0.54 -0.04 23.3 82 2 3 1 3 3 0 0  1651 DAN A
14 2.21 15.2 -1.63 -0.31 32.3 80 3 3 1 2 3 0 0  1651 DAN A
15 2.04 9.1 -1.91 -0.66 12.1 85 1 0 2 0 1 0 0  
16 2.05 10.5 -1.64 -0.47 12.0 80 1 1 1 1 1 0 0  
17 1.34 10.5 -1.85 0.00 25.3 87 3 0 2 0 1 0 0  
18 1.71 7.6 -1.54 -0.50 4.8 81 1 0 1 0 1 0 0  
19 1.61 10.9 -1.44 -0.39 7.7 79 1 0 1 1 1 0 0  
20 1.94 3.6 -0.74 -0.27 2.7 72 0 0 2 2 1 0 0  
21 1.66 8.3 -0.65 -0.26 2.8 79 0 0 2 1 2 0 0  
22 2.08 6.3 -1.46 -0.54 17.4 79 2 1 1 1 1 0 0  
23 1.66 9.6 -2.29 -0.76 16.5 73 1 1 1 0 1 0 0  
24 1.48 10.8 -1.77 0.03 25.4 87 3 0 2 0 1 0 0  
25 1.82 7.6 -0.63 -0.46 9.6 70 1 2 0 1 0 1 0  
26 1.89 8.0 -0.87 -0.37 13.8 70 1 2 0 1 0 1 0  
27 1.95 6.0 -0.63 -0.40 10.1 70 1 2 0 1 0 1 0  
28 1.47 12.0 0.33 -0.22 4.3 83 0 1 1 4 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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