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PDBsum entry 1w4c

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 1w4c calculated with MOLE 2.0 PDB id
1w4c
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 2.21 44.0 -0.51 -0.30 16.8 90 4 4 3 6 0 0 0  
2 1.53 1.64 107.3 -1.68 -0.41 23.4 85 9 5 7 4 2 0 0  
3 1.35 2.05 117.7 -1.08 -0.37 18.0 89 8 11 11 12 2 0 0  
4 1.47 2.38 122.5 -1.43 -0.43 22.7 88 9 9 9 5 2 0 0  
5 1.41 2.34 137.9 -1.03 -0.40 18.9 88 11 11 10 8 2 0 0  
6 1.47 2.32 141.3 -1.56 -0.48 23.6 88 10 9 10 5 2 0 0  
7 1.74 1.77 142.2 -0.85 -0.31 17.2 90 7 9 11 16 3 0 0  
8 1.51 2.20 156.4 -1.30 -0.37 20.4 85 12 8 9 8 4 0 0  
9 1.48 2.40 170.4 -1.49 -0.44 23.6 87 11 10 11 12 2 0 0  
10 1.39 1.40 177.3 -1.23 -0.44 20.4 86 13 12 11 13 2 0 0  
11 1.14 1.84 206.5 -1.21 -0.39 21.9 84 14 13 8 15 3 0 0  
12 1.47 2.12 219.3 -1.52 -0.38 22.6 84 15 15 13 14 3 0 0  
13 1.66 2.00 210.2 -0.97 -0.26 19.7 85 11 11 8 16 5 0 0  
14 2.31 3.44 231.2 -1.24 -0.26 17.4 87 15 10 25 16 3 0 0  
15 1.37 2.42 229.8 -1.32 -0.31 18.0 85 16 12 19 16 2 0 0  
16 1.08 1.42 240.3 -1.22 -0.31 19.2 87 18 12 17 14 6 0 0  
17 1.30 2.36 264.9 -1.38 -0.43 20.2 85 17 15 18 14 5 0 0  
18 1.17 1.30 255.4 -1.36 -0.40 19.5 86 14 14 17 19 4 0 0  
19 1.04 1.21 257.5 -1.43 -0.34 19.5 85 15 12 20 20 2 0 0  
20 1.50 2.07 275.7 -1.30 -0.35 18.2 87 20 14 27 17 3 0 0  
21 1.35 1.95 277.2 -0.86 -0.27 18.9 86 14 20 19 24 5 0 0  
22 1.56 1.82 299.4 -1.49 -0.37 19.8 85 19 15 22 14 8 0 0  
23 2.00 2.57 296.3 -1.42 -0.30 18.1 86 18 16 27 19 4 0 0  
24 1.47 2.32 304.0 -1.00 -0.34 17.4 87 20 15 19 23 7 2 0  
25 1.49 1.65 304.6 -1.06 -0.29 18.8 86 21 12 18 19 8 0 0  
26 1.44 1.73 317.7 -1.16 -0.35 19.3 87 21 18 20 20 6 0 0  
27 1.48 2.05 319.7 -1.15 -0.37 19.0 86 17 14 18 24 6 0 0  
28 1.08 1.27 330.1 -1.02 -0.30 19.9 86 17 19 20 27 5 0 0  
29 1.27 1.51 342.3 -1.01 -0.25 16.7 87 18 20 32 27 5 0 0  
30 1.21 1.35 395.3 -1.08 -0.27 17.4 87 21 19 33 29 5 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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