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PDBsum entry 1w20

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1w20 calculated with MOLE 2.0 PDB id
1w20
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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20 tunnels, coloured by tunnel radius 16 tunnels, coloured by tunnel radius 16 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.49 15.0 -1.30 -0.62 20.0 85 2 3 0 3 0 0 1  4477 SIA D
2 1.46 23.1 -1.86 -0.62 25.3 84 3 4 1 3 0 1 1  1477 SIA A
3 1.55 18.8 -1.89 -0.56 26.3 83 3 3 1 2 0 1 1  2477 SIA B
4 1.65 11.5 -1.98 -0.37 23.4 76 1 3 1 2 1 0 0  
5 1.32 14.0 -1.94 -0.51 23.9 78 2 2 1 1 1 0 0  
6 1.71 12.1 -2.33 -0.49 20.4 80 2 3 1 1 1 0 0  
7 1.39 14.0 -2.03 -0.55 21.4 84 2 2 1 1 1 0 0  
8 2.18 6.4 -1.12 -0.31 20.0 81 1 1 0 2 1 0 0  
9 1.76 12.0 -0.38 -0.47 9.2 88 2 1 0 2 0 0 0  
10 1.75 13.5 -0.36 -0.47 9.3 88 2 1 0 2 0 0 0  
11 1.89 8.3 -0.96 -0.16 21.0 81 1 1 0 3 1 0 0  
12 1.81 12.6 -0.31 -0.45 9.0 88 2 1 0 2 0 0 0  
13 2.04 7.6 -0.66 -0.78 6.4 72 0 1 0 0 0 2 0  
14 2.49 3.5 -0.89 -0.38 21.0 84 2 2 0 1 0 0 0  
15 1.40 7.2 -1.92 -0.66 30.9 67 1 1 0 1 0 0 0  
16 1.77 11.8 -0.34 -0.45 8.7 89 2 0 1 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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