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Ligand clusters for UniProt code Q6XV27

Ligand clusters for Q6XV27: Neuraminidase OS=Influenza A virus (strain A/Duck/England/1/1956 H11N6) GN=NA PE=1 SV=1

Top 6 (of 11) ligand clusters
Cluster 1.
7 ligand types
21 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
4 ligands
Cluster 5.
2 ligand types
5 ligands
Cluster 6.
1 ligand type
5 ligands
Representative protein: 1v0zA  
 

Structures

PDB   Schematic diagram
1v0zA    
1w1xA    
2cmlA    
1w21A    
1w20A    

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: NAG × 6
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 1v0z(A), 1w1x(A), 2cml(A),


 
2. Ligand: MAN × 7
Alpha-D-Mannose
PDB codes: 1w1x(A), 1w20(A), 1w21(A),


 
3. Ligand: BMA × 3
Beta-D-Mannose
PDB codes: 1w20(A), 1w21(A), 2cml(A).


 
4. Ligand: NAG-NAG × 2
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 1w20(A), 1w21(A).


 
5. Ligand: BMA-MAN-MAN × 1
BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose.
PDB code: 1w1x(A).


 
6. Ligand: MAN-MAN-MAN × 1
MAN=Alpha-D-Mannose.
PDB code: 2cml(A).


 
7. Ligand: MAN-MAN-MAN-BMA-MAN × 1
MAN=Alpha-D-Mannose, BMA=Beta-D-Mannose.
PDB code: 1v0z(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG-NAG × 1
NAG=N-Acetyl-D-Glucosamine.
PDB code: 2cml(A).


 
2. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1
NAG=N-Acetyl-D-Glucosamine, MAN=Alpha-D-Mannose, BMA=Beta-D-Mannose.
PDB code: 1v0z(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: SIA × 3
O-Sialic acid
PDB codes: 1w1x(A), 1w20(A), 1w21(A).


 
2. Ligand: ZMR × 1
zanamivir
Zanamivir
PDB code: 2cml(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: SIA × 3
O-Sialic acid
PDB codes: 1w1x(A), 1w20(A), 1w21(A).


 
2. Ligand: ZMR × 1
zanamivir
Zanamivir
PDB code: 2cml(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 3
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 1w1x(A), 1w20(A), 1w21(A).


 
2. Ligand: NAG-NAG × 2
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 1v0z(A), 2cml(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 5
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 1v0z(A), 1w1x(A), 1w20(A), 1w21(A), 2cml(A).

 

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