PDBsum entry 1vz8 Go to PDB code:  Tunnel analysis for: 1vz8 calculated with MOLE 2.0 PDB id 1vz8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.40 1.40 54.2 -1.80 -0.54 19.2 85 7 7 2 2 1 3 0   2 1.41 1.41 56.8 -1.98 -0.52 23.2 83 8 8 2 2 1 2 1   3 1.40 1.40 62.0 -1.21 -0.39 15.4 84 7 5 2 3 2 2 0   4 1.39 1.39 78.8 -1.76 -0.47 22.2 85 9 9 2 6 1 2 0   5 1.39 1.39 85.9 -1.87 -0.53 21.7 82 12 8 3 3 1 4 0  MSE 147 D 6 1.08 1.20 28.6 -1.00 -0.51 14.5 83 3 2 0 3 1 1 0  MSE 147 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.