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PDBsum entry 1vz7
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Pore analysis for: 1vz7 calculated with  MOLE 2.0
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PDB id
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1vz7
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.88 |
3.03 |
29.3 |
-1.96 |
-0.55 |
27.8 |
86 |
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4 |
5 |
1 |
3 |
0 |
0 |
0 |
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2 |
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1.24 |
1.44 |
44.3 |
-0.87 |
-0.43 |
18.2 |
78 |
2 |
3 |
1 |
3 |
1 |
0 |
0 |
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3 |
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2.57 |
3.45 |
46.7 |
-1.39 |
-0.29 |
26.7 |
83 |
8 |
7 |
0 |
6 |
1 |
0 |
1 |
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4 |
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3.08 |
3.76 |
57.2 |
-2.61 |
-0.47 |
38.0 |
82 |
9 |
9 |
1 |
3 |
0 |
0 |
1 |
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5 |
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2.69 |
2.76 |
83.5 |
-2.31 |
-0.50 |
32.1 |
86 |
10 |
7 |
2 |
6 |
0 |
0 |
0 |
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6 |
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1.36 |
2.00 |
82.9 |
-1.15 |
-0.49 |
16.5 |
80 |
3 |
4 |
1 |
3 |
0 |
2 |
0 |
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7 |
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1.10 |
1.21 |
101.4 |
-0.37 |
-0.24 |
16.0 |
88 |
5 |
4 |
0 |
11 |
1 |
1 |
0 |
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8 |
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1.85 |
2.32 |
104.4 |
-1.71 |
-0.47 |
26.5 |
86 |
9 |
7 |
1 |
6 |
1 |
1 |
0 |
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9 |
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1.96 |
2.12 |
113.5 |
-2.41 |
-0.53 |
34.1 |
85 |
14 |
13 |
0 |
5 |
1 |
1 |
1 |
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10 |
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1.22 |
1.53 |
121.6 |
-1.93 |
-0.46 |
29.2 |
85 |
17 |
16 |
0 |
10 |
0 |
2 |
1 |
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11 |
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1.24 |
1.42 |
147.8 |
-1.86 |
-0.46 |
27.4 |
87 |
18 |
14 |
1 |
13 |
0 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program