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PDBsum entry 1vyt
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Pore analysis for: 1vyt calculated with  MOLE 2.0
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PDB id
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1vyt
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.81 |
5.05 |
25.4 |
-2.20 |
-0.25 |
23.8 |
75 |
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3 |
3 |
3 |
1 |
2 |
3 |
0 |
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2 |
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2.53 |
4.02 |
42.2 |
-2.30 |
-0.56 |
27.6 |
83 |
6 |
6 |
4 |
2 |
1 |
1 |
0 |
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3 |
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1.19 |
1.49 |
50.7 |
-1.49 |
-0.36 |
20.2 |
83 |
5 |
5 |
7 |
5 |
3 |
1 |
0 |
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4 |
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1.18 |
1.48 |
53.0 |
-1.14 |
-0.33 |
16.8 |
82 |
4 |
5 |
6 |
6 |
4 |
1 |
0 |
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5 |
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2.14 |
2.15 |
91.8 |
-2.07 |
-0.49 |
23.5 |
77 |
12 |
3 |
4 |
2 |
0 |
2 |
0 |
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6 |
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2.09 |
2.15 |
126.2 |
-2.03 |
-0.41 |
25.9 |
79 |
14 |
4 |
4 |
3 |
1 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program