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PDBsum entry 1vto
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Tunnel analysis for: 1vto calculated with  MOLE 2.0
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PDB id
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1vto
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.39 |
1.54 |
15.5 |
0.05 |
-0.39 |
4.6 |
66 |
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3 |
0 |
0 |
2 |
3 |
2 |
0 |
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DG 310 E DG 311 E DG 312 E
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2 |
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1.39 |
1.54 |
16.7 |
0.07 |
-0.38 |
6.0 |
68 |
3 |
0 |
0 |
2 |
3 |
1 |
0 |
DG 310 E DG 311 E DG 312 E DC 313 E
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3 |
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1.39 |
1.55 |
15.5 |
0.00 |
-0.28 |
2.4 |
62 |
0 |
0 |
0 |
1 |
3 |
1 |
0 |
DG 210 C DG 211 C DG 212 C
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4 |
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1.39 |
1.54 |
15.6 |
0.03 |
-0.55 |
2.9 |
67 |
0 |
0 |
0 |
1 |
2 |
0 |
0 |
DG 210 C DG 211 C DG 212 C DC 213 C DC 219 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program