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PDBsum entry 1vq6

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 1vq6 calculated with MOLE 2.0 PDB id
1vq6
Pores calculated on whole structure Pores calculated excluding ligands

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35 pores, coloured by radius 35 pores, coloured by radius 35 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.52 94.4 -1.06 -0.70 11.1 87 5 1 1 1 1 0 0  G 307 0 C 309 0 U 310 0 C 311 0 U 312 0 G 314 0 A
316 0 A 317 0 C 318 0 A 319 0 G 320 0 A 321 0 G
322 0 C 323 0 C 330 0 A 331 0 G 332 0 A 340 0 C
341 0 U 1279 0 G 1300 0 C 1301 0 C 1303 0 C 1305
0 U 1306 0 A 1307 0 A 1308 0 G 1344 0 A 1345 0 U
1346 0 U 1347 0 A 1348 0 G 1349 0 U 1350 0
2 1.96 1.96 105.5 -0.60 -0.75 4.6 92 1 0 2 0 0 1 0  U 733 0 U 734 0 C 735 0 G 740 0 C 741 0 G 928 0 A
929 0 C 930 0 C 931 0 U 932 0 C 933 0 C 934 0 G
935 0 G 1031 0 A 1032 0 C 1033 0 G 1034 0 C 1035
0 G 1036 0 G 1037 0 C 1272 0 U 1279 0 U 1298 0 G
1299 0 G 1300 0 A 1348 0 G 2383 0 U 2384 0 G 2385
0 A 2395 0 C 2396 0 G 2397 0 A 2398 0 A 2437 0 G
2438 0 A 2455 0 A 2456 0
3 1.43 1.55 144.7 -1.45 -0.73 15.9 82 5 4 3 0 1 1 0  U 2328 0 C 2329 0 U 2330 0 A 2368 0 U 2373 0 A
2374 0 G 2375 0 U 3023 9 C 3030 9 C 3031 9 G 3032
9 U 3033 9 U 3039 9 C 3040 9 C 3041 9 C 3042 9 A
3044 9 A 3045 9 C 3046 9 A 3047 9 C 3048 9 A 3052
9 G 3053 9
4 2.06 2.06 157.2 -0.64 -0.79 4.4 87 2 1 3 0 0 1 0  G 740 0 C 741 0 G 928 0 A 929 0 C 930 0 C 931 0 U
932 0 C 933 0 C 934 0 G 935 0 G 1031 0 A 1032 0 C
1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037 0 C 1272
0 U 1279 0 U 1298 0 G 1299 0 G 1300 0 A 1348 0 U
2322 0 G 2323 0 G 2324 0 C 2325 0 A 2370 0 G 2371
0 U 2373 0 A 2374 0 G 2375 0 U 2384 0 G 2385 0 U
2386 0 U 2387 0 A 2395 0 C 2396 0 G 2397 0 A 2398
0 G 2399 0 G 2400 0 A 2401 0 A 2402 0 C 2403 0 G
2418 0 U 2419 0 G 2420 0 G 2421 0 U 2422 0 MG
8049 0 NA 9113 0 C 3040 9
5 1.56 1.75 160.5 -0.83 -0.76 8.1 84 5 3 2 1 0 1 0  G 1563 0 C 1564 0 U 1740 0 U 1741 0 A 1742 0 G
1743 0 C 1787 0 C 2510 0 U 2512 0 A 2513 0 U 2557
0 G 2558 0 C 2560 0 C 2561 0 G 2562 0 U 2563 0 C
2565 0 A 2569 0 G 2570 0 C 2571 0 A 2684 0 C 2685
0 C 2686 0 A 2703 0 C 2704 0 U 2705 0 C 2707 0 G
2708 0 G 2709 0 U 2710 0 U 2711 0 U 2721 0 G 2722
0 G 2723 0 U 2724 0 C 2729 0 G 2730 0 G 2731 0 U
2732 0 U 2733 0 A 2739 0 G 2740 0 A 2741 0 G 2742
0 A 2743 0 G 2744 0 U 2749 0 G 2750 0 C 2752 0 G
2753 0 G 2754 0 G 2755 0 C 2764 0 C 2765 0 A 2766
0 C 2767 0 A 2768 0 C 2769 0 A 2880 0 C 2881 0 G
2882 0 A 2883 0 G 2884 0
6 1.34 1.49 159.3 -0.86 -0.73 11.5 86 4 4 1 4 0 1 0  C 57 0 C 58 0 G 89 0 A 495 0 A 497 0 U 1388 0 G
1389 0 A 1390 0 G 1391 0 G 1410 0 A 1411 0 C 1421
0 U 1422 0 C 1423 0 A 1424 0 G 1425 0 C 1426 0 U
1435 0 C 1436 0 A 1437 0 G 1438 0 G 1441 0 A 1442
0 G 1443 0 C 1545 0 G 1546 0 A 1547 0 U 1548 0 C
1549 0 A 1550 0 C 1551 0 C 1564 0 C 1565 0 C 1566
0 A 1567 0 G 1568 0 U 1569 0 C 1680 0 A 1685 0 A
1717 0 G 1718 0 G 1719 0 C 1720 0
7 1.38 1.50 161.4 -0.95 -0.52 12.8 85 7 2 1 5 1 1 0  C 29 0 C 31 0 C 57 0 C 58 0 C 87 0 G 89 0 G 307 0
C 309 0 U 310 0 C 311 0 U 312 0 G 314 0 A 316 0 A
317 0 C 318 0 A 319 0 G 320 0 A 321 0 G 322 0 C
323 0 C 330 0 G 332 0 G 333 0 G 334 0 U 335 0 A
337 0 C 338 0 A 339 0 A 340 0 C 341 0 A 462 0 G
479 0 C 480 0 U 481 0 G 482 0 C 483 0 A 484 0 A
497 0 G 514 0 C 1342 0 A 1424 0 G 1441 0 A 1442 0
G 1443 0
8 1.22 1.22 179.8 -1.11 -0.68 12.4 81 6 5 4 3 2 1 0  C 2317 0 C 2318 0 C 2319 0 C 2325 0 U 2326 0 A
2327 0 U 2328 0 A 2368 0 A 2369 0 A 2370 0 A 2401
0 A 2402 0 C 2417 0 G 2418 0 U 2419 0 G 2420 0 G
2421 0 U 2422 0 C 2423 0 U 2424 0 G 2426 0 C 2427
0 MG 8049 0 U 3023 9 C 3030 9 C 3031 9 G 3032 9 U
3033 9 A 3044 9 A 3045 9 C 3046 9 A 3047 9 C 3048
9 A 3052 9 G 3053 9
9 1.80 1.80 183.4 -0.98 -0.80 11.5 83 5 9 2 0 1 1 0  A 37 0 U 146 0 G 147 0 A 148 0 G 149 0 G 150 0 C
153 0 C 154 0 C 155 0 A 174 0 U 176 0 A 177 0 U
178 0 C 179 0 G 180 0 G 181 0 G 182 0 A 183 0 C
208 0 G 209 0 C 440 0 U 645 0 G 646 0 U 647 0 G
648 0 U 649 0 C 650 0 A 665 0 A 666 0 A 750 0 U
751 0 G 752 0 U 753 0 G 754 0 G 755 0 U 1279 0 G
1300 0 A 1348 0 G 1349 0 U 1350 0 G 1351 0 C 1353
0 A 1459 0 G 1460 0 U 1461 0 C 1462 0 A 1463 0 U
1464 0 A 1465 0 C 1466 0 C 1467 0 C 1472 0 U 1473
0 G 1475 0 A 1476 0 C 1477 0 U 1478 0 A 1479 0 U
1480 0 C 1872 0 C 2248 0 G 2249 0 G 2250 0 MG
8050 0 NA 9104 C
10 1.54 1.54 189.1 -0.70 -0.78 6.2 87 2 4 5 1 0 1 1  A 37 0 G 38 0 G 39 0 C 136 0 U 137 0 U 138 0 G
142 0 C 143 0 A 144 0 A 145 0 G 209 0 A 234 0 C
235 0 A 236 0 C 252 0 U 253 0 A 255 0 G 257 0 G
258 0 U 286 0 C 287 0 A 288 0 G 289 0 C 294 0 C
295 0 G 296 0 C 356 0 U 359 0 A 360 0 C 361 0 U
434 0 U 645 0 G 646 0 U 647 0 G 648 0 U 649 0 C
650 0 A 665 0 A 666 0 C 667 0 C 668 0 G 669 0 A
671 0 U 673 0 A 674 0 A 750 0 U 751 0 G 752 0 U
753 0 G 754 0 G 755 0 U 1279 0 G 1300 0 A 1348 0
G 1349 0 U 1350 0 G 1351 0 C 1353 0 NA 9104 C
11 1.67 1.67 201.6 -0.83 -0.73 8.0 83 4 4 4 1 1 2 1  G 41 0 C 42 0 U 43 0 A 49 0 G 64 0 C 65 0 C 101 0
A 102 0 U 103 0 G 104 0 C 136 0 U 137 0 U 138 0 G
142 0 C 143 0 A 144 0 A 145 0 G 185 0 C 252 0 U
253 0 A 255 0 G 257 0 G 258 0 A 288 0 G 289 0 C
300 0 G 301 0 G 307 0 C 309 0 U 310 0 C 311 0 U
312 0 G 314 0 A 316 0 A 317 0 C 318 0 A 319 0 G
320 0 A 321 0 G 322 0 C 323 0 C 330 0 A 331 0 G
332 0 A 340 0 C 341 0 U 346 0 A 347 0 C 355 0 G
358 0 U 359 0 U 434 0 A 435 0 C 443 0 C 444 0 U
445 0 G 446 0 A 447 0 U 673 0 A 1307 0
12 1.28 1.40 195.0 -1.18 -0.72 12.7 83 5 6 4 1 1 1 0  U 733 0 U 734 0 C 735 0 G 740 0 C 2325 0 U 2326 0
A 2327 0 U 2328 0 A 2368 0 A 2369 0 A 2370 0 G
2383 0 U 2384 0 G 2385 0 A 2398 0 G 2399 0 G 2400
0 A 2401 0 A 2402 0 C 2403 0 C 2417 0 G 2418 0 U
2419 0 G 2420 0 G 2421 0 U 2422 0 A 2437 0 G 2438
0 A 2455 0 A 2456 0 MG 8049 0 U 3023 9 C 3030 9 C
3031 9 G 3032 9 U 3033 9 A 3044 9 A 3045 9 C 3046
9 A 3047 9 C 3048 9 A 3052 9 G 3053 9
13 1.82 1.83 199.9 -1.03 -0.75 11.0 83 6 5 1 0 1 1 0  A 37 0 G 38 0 A 174 0 C 208 0 G 209 0 G 213 0 U
214 0 G 223 0 U 224 0 G 225 0 A 226 0 C 298 0 G
307 0 C 309 0 U 310 0 C 311 0 U 312 0 G 314 0 A
316 0 A 317 0 C 318 0 A 319 0 G 320 0 A 321 0 G
322 0 C 323 0 C 330 0 A 331 0 G 332 0 A 340 0 C
341 0 A 347 0 C 440 0 G 446 0 A 447 0 U 647 0 G
648 0 U 649 0 C 650 0 U 651 0 A 666 0 C 667 0 C
668 0 A 671 0 U 673 0 A 674 0 U 733 0 U 734 0 C
735 0 G 740 0 C 741 0 G 742 0 C 757 0 A 758 0 C
759 0 G 1037 0 A 1307 0 G 2383 0 U 2384 0 G 2385
0 G 2397 0 A 2398 0 A 2437 0 G 2438 0 A 2455 0 A
2456 0 NA 9104 C
14 1.09 1.64 201.1 -1.14 -0.63 14.8 84 8 6 4 5 1 1 0  C 57 0 C 58 0 G 89 0 A 466 0 G 467 0 U 468 0 A
476 0 A 497 0 A 498 0 G 499 0 G 514 0 A 767 0 U
768 0 C 769 0 C 770 0 G 771 0 G 772 0 A 773 0 A
844 0 U 866 0 A 867 0 G 868 0 G 869 0 A 882 0 U
883 0 G 887 0 U 888 0 C 889 0 C 890 0 A 1424 0 A
1427 0 C 1428 0 G 1441 0 A 1442 0 G 1443 0 G 1460
0 U 1461 0 C 1474 0 G 1475 0 A 1476 0 C 1477 0 U
1478 0 A 1479 0 A 1689 0 C 1862 0 G 1863 0 A 1869
0 C 1872 0 C 2248 0 G 2249 0 G 2250 0 MG 8050 0
15 1.30 1.49 210.2 -0.78 -0.64 9.7 85 4 3 3 5 0 2 1  C 31 0 G 41 0 C 42 0 U 43 0 A 49 0 C 57 0 C 58 0
C 62 0 U 63 0 G 64 0 C 65 0 C 85 0 A 86 0 G 89 0
A 102 0 U 103 0 G 104 0 C 136 0 U 137 0 U 138 0 G
142 0 C 143 0 A 144 0 A 145 0 G 185 0 C 252 0 U
253 0 A 255 0 G 257 0 G 258 0 A 288 0 G 289 0 C
355 0 G 358 0 U 359 0 U 434 0 A 435 0 C 443 0 C
444 0 C 461 0 A 462 0 G 479 0 C 480 0 A 497 0 G
514 0 A 1424 0 G 1441 0 A 1442 0 G 1443 0
16 1.15 1.51 213.0 -1.02 -0.69 13.7 88 8 8 3 5 0 1 0  C 31 0 G 32 0 G 33 0 U 35 0 C 36 0 A 37 0 G 50 0
C 57 0 C 58 0 C 62 0 U 63 0 G 64 0 C 85 0 A 86 0
G 89 0 A 151 0 G 209 0 C 440 0 A 441 0 A 442 0 C
443 0 A 459 0 C 461 0 A 462 0 A 463 0 G 464 0 G
479 0 C 480 0 A 497 0 G 514 0 U 645 0 G 646 0 U
647 0 G 648 0 U 649 0 C 650 0 A 665 0 A 666 0 A
750 0 U 751 0 G 752 0 U 753 0 G 754 0 G 755 0 U
1279 0 G 1300 0 A 1348 0 G 1349 0 U 1350 0 G 1351
0 C 1353 0 A 1424 0 G 1441 0 A 1442 0 G 1443 0 NA
9104 C
17 1.75 1.75 220.7 -1.00 -0.76 11.4 79 6 9 0 0 2 1 0  A 37 0 G 38 0 U 146 0 G 147 0 A 148 0 G 149 0 G
150 0 C 153 0 C 154 0 C 155 0 A 174 0 U 176 0 A
177 0 U 178 0 C 179 0 G 180 0 G 181 0 G 182 0 A
183 0 C 208 0 G 209 0 C 298 0 G 307 0 C 309 0 U
310 0 C 311 0 U 312 0 G 314 0 A 316 0 A 317 0 C
318 0 A 319 0 G 320 0 A 321 0 G 322 0 C 323 0 C
330 0 A 331 0 G 332 0 A 340 0 C 341 0 A 347 0 C
440 0 G 446 0 A 447 0 U 647 0 A 666 0 C 667 0 C
668 0 A 671 0 U 673 0 A 674 0 A 1307 0 A 1459 0 G
1460 0 U 1461 0 C 1462 0 A 1463 0 U 1464 0 A 1465
0 C 1466 0 C 1467 0 C 1472 0 U 1473 0 G 1475 0 A
1476 0 C 1477 0 U 1478 0 A 1479 0 U 1480 0 C 1872
0 C 2248 0 G 2249 0 G 2250 0 MG 8050 0 NA 9104 C
18 2.10 2.10 220.9 -0.45 -0.79 4.5 94 1 2 1 1 0 0 0  U 909 0 C 910 0 G 911 0 A 913 0 A 914 0 C 915 0 A
929 0 C 930 0 C 931 0 C 933 0 C 934 0 A 943 0 U
1030 0 G 1031 0 A 1032 0 C 1033 0 G 1046 0 U 1047
0 G 1048 0 C 1049 0 C 1051 0 A 1058 0 G 1059 0 C
1060 0 U 1062 0 G 1063 0 U 1064 0 G 1065 0 U 1066
0 G 1119 0 U 1120 0 C 1126 0 C 1127 0 U 1128 0 C
1129 0 U 1130 0 C 1228 0 C 1229 0 A 1230 0 A 1231
0 A 1232 0 A 1236 0 U 1237 0 C 1238 0 A 1271 0 C
1272 0 U 1279 0 C 1289 0 U 1298 0 G 1299 0 G 1300
0 A 1348 0 G 2068 0 U 2492 0 C 2493 0 U 2499 0 A
2513 0 G 2524 0 G 2525 0 A 2553 0 U 2554 0 C 2555
0 C 2556 0 U 2557 0 C 2560 0 C 2561 0 G 2562 0 U
2563 0 C 2565 0 G 2570 0 C 2571 0 G 2572 0 G 2573
0 G 2574 0 C 2575 0 A 2776 0 MG 8025 0 C 3091 9 G
3092 9 A 3093 9
19 1.49 1.49 232.4 -0.89 -0.78 9.3 82 4 8 4 1 0 2 1  U 35 0 G 41 0 C 42 0 U 43 0 A 49 0 G 50 0 U 63 0
G 64 0 C 65 0 U 103 0 G 104 0 C 136 0 U 137 0 U
138 0 G 142 0 C 143 0 A 144 0 A 145 0 A 151 0 C
153 0 A 174 0 G 175 0 U 176 0 A 177 0 G 185 0 C
208 0 G 213 0 U 214 0 G 223 0 U 224 0 G 225 0 A
226 0 C 252 0 U 253 0 A 255 0 G 257 0 G 258 0 A
288 0 G 289 0 C 355 0 G 358 0 U 359 0 U 434 0 A
435 0 C 440 0 A 441 0 A 442 0 C 443 0 A 459 0 G
464 0 U 647 0 G 648 0 U 649 0 C 650 0 U 651 0 U
733 0 U 734 0 C 735 0 G 740 0 C 741 0 G 742 0 C
757 0 A 758 0 C 759 0 G 1037 0 G 2383 0 U 2384 0
G 2385 0 G 2397 0 A 2398 0 A 2437 0 G 2438 0 C
2439 0 A 2455 0 A 2456 0
20 1.39 1.46 231.2 -1.08 -0.70 13.5 83 8 7 1 4 0 2 0  C 31 0 G 32 0 G 33 0 U 35 0 G 50 0 C 57 0 C 58 0
C 62 0 U 63 0 G 64 0 C 85 0 A 86 0 G 89 0 A 151 0
C 153 0 A 174 0 U 176 0 A 177 0 C 208 0 G 213 0 U
214 0 G 223 0 U 224 0 G 225 0 A 226 0 C 440 0 A
441 0 A 442 0 C 443 0 A 459 0 C 461 0 A 462 0 A
463 0 G 464 0 G 479 0 C 480 0 A 497 0 G 514 0 U
647 0 G 648 0 U 649 0 C 650 0 U 651 0 U 733 0 U
734 0 C 735 0 G 740 0 C 741 0 G 742 0 C 757 0 A
758 0 C 759 0 G 1037 0 A 1424 0 G 1441 0 A 1442 0
G 1443 0 G 2383 0 U 2384 0 G 2385 0 G 2397 0 A
2398 0 A 2437 0 G 2438 0 A 2455 0 A 2456 0
21 1.77 1.93 237.1 -1.05 -0.66 12.4 84 10 4 1 3 1 0 0  C 29 0 C 31 0 C 87 0 G 307 0 C 309 0 U 310 0 C
311 0 U 312 0 G 314 0 A 316 0 A 317 0 C 318 0 A
319 0 G 320 0 A 321 0 G 322 0 C 323 0 C 330 0 G
332 0 G 333 0 G 334 0 U 335 0 A 337 0 C 338 0 A
339 0 A 340 0 C 341 0 A 462 0 G 479 0 C 480 0 U
481 0 G 482 0 C 483 0 A 484 0 A 495 0 A 497 0 G
514 0 C 1342 0 U 1388 0 G 1389 0 A 1390 0 G 1391
0 G 1410 0 A 1411 0 C 1421 0 U 1422 0 C 1423 0 A
1424 0 G 1425 0 C 1426 0 U 1435 0 C 1436 0 A 1437
0 G 1438 0 G 1441 0 C 1545 0 G 1546 0 A 1547 0 U
1548 0 C 1549 0 A 1550 0 C 1551 0 C 1564 0 C 1565
0 C 1566 0 A 1567 0 G 1568 0 U 1569 0 C 1680 0 A
1685 0 A 1717 0 G 1718 0 G 1719 0 C 1720 0
22 1.89 1.89 236.1 -0.61 -0.74 5.7 93 6 0 4 2 0 0 0  A 635 0 G 636 0 C 637 0 C 638 0 A 639 0 G 640 0 U
825 0 G 828 0 G 830 0 U 831 0 C 839 0 U 845 0 A
846 0 C 847 0 C 848 0 C 849 0 U 850 0 U 1279 0 G
1300 0 C 1301 0 G 1302 0 C 1303 0 G 1319 0 U 1320
0 A 1331 0 C 1332 0 U 1333 0 A 1345 0 U 1346 0 U
1347 0 A 1348 0 G 1349 0 U 1350 0 A 1355 0 A 1356
0 A 1357 0 C 1360 0 C 1361 0 U 1362 0 G 1363 0 G
1364 0 G 1378 0 A 1379 0 A 1381 0 C 1403 0 C 1404
0 U 1405 0 A 1407 0 U 1561 0 C 1562 0 A 1712 0 G
1713 0 C 1714 0 G 1837 0 U 1838 0 C 2056 0 G 2099
0 A 2100 0 A 2103 0 C 2644 0 U 2645 0 G 2646 0 C
2728 0 C 2729 0 G 2730 0 G 2731 0 U 2732 0 U 2733
0 G 2740 0 A 2741 0 G 2742 0 A 2743 0 G 2744 0 C
2745 0 A 2746 0 C 2747 0 G 2748 0 U 2749 0 G 2750
0 G 2869 0 C 2870 0 G 2871 0 C 2881 0 G 2882 0 A
2883 0 G 2884 0 MG 8024 0 MG 8048 0 MG 8063 0 NA
9179 0
23 2.00 2.00 239.9 -0.53 -0.78 4.7 88 2 1 1 1 0 1 0  U 733 0 U 734 0 C 735 0 G 740 0 C 741 0 A 913 0 A
914 0 C 915 0 G 928 0 A 929 0 C 930 0 C 931 0 U
932 0 A 943 0 C 1033 0 G 1034 0 C 1035 0 G 1036 0
G 1037 0 G 1046 0 U 1047 0 G 1048 0 C 1049 0 C
1051 0 A 1058 0 G 1059 0 C 1060 0 U 1062 0 G 1063
0 U 1064 0 G 1065 0 U 1066 0 G 1119 0 U 1120 0 C
1126 0 C 1127 0 U 1128 0 C 1129 0 U 1130 0 C 1228
0 C 1229 0 A 1230 0 A 1231 0 A 1232 0 A 1236 0 U
1237 0 C 1238 0 G 2068 0 G 2383 0 U 2384 0 G 2385
0 A 2395 0 C 2396 0 G 2397 0 A 2398 0 A 2437 0 G
2438 0 A 2455 0 A 2456 0 U 2492 0 C 2493 0 U 2499
0 C 2510 0 U 2512 0 A 2513 0 G 2524 0 G 2525 0 A
2553 0 U 2554 0 C 2555 0 C 2556 0 U 2557 0 C 2560
0 C 2561 0 G 2562 0 U 2563 0 C 2565 0 G 2570 0 C
2571 0 G 2572 0 G 2573 0 G 2574 0 C 2575 0 A 2776
0 C 3091 9 G 3092 9 A 3093 9
24 1.22 2.54 258.2 -0.76 -0.52 13.1 85 10 8 3 13 1 2 0  C 31 0 G 32 0 G 33 0 U 35 0 G 50 0 C 57 0 C 58 0
C 62 0 U 63 0 G 64 0 C 85 0 A 86 0 G 89 0 A 151 0
C 153 0 A 174 0 G 175 0 U 176 0 A 177 0 C 208 0 G
213 0 U 214 0 G 223 0 U 224 0 G 225 0 A 226 0 C
440 0 A 441 0 A 442 0 C 443 0 A 459 0 C 461 0 A
462 0 A 463 0 G 464 0 G 479 0 C 480 0 A 497 0 G
514 0 U 647 0 G 648 0 U 649 0 C 650 0 U 651 0 G
652 0 A 686 0 G 690 0 A 708 0 A 721 0 G 722 0 G
723 0 G 742 0 G 743 0 G 747 0 C 757 0 A 758 0 C
759 0 C 936 0 C 937 0 G 1036 0 A 1424 0 G 1441 0
A 1442 0 G 1443 0
25 1.53 1.55 264.8 -1.03 -0.61 13.0 84 7 2 4 7 1 1 0  C 57 0 C 58 0 G 89 0 A 466 0 G 467 0 A 476 0 A
497 0 A 498 0 G 499 0 G 514 0 A 844 0 U 845 0 A
1424 0 A 1427 0 C 1428 0 G 1441 0 A 1442 0 G 1443
0 C 1983 0 G 2099 0 A 2103 0 C 2496 0 A 2497 0 C
2498 0 A 2513 0 U 2527 0 U 2528 0 G 2540 0 C 2555
0 C 2556 0 U 2557 0 C 2560 0 C 2561 0 G 2562 0 U
2563 0 C 2565 0 G 2570 0 C 2571 0 U 2589 0 U 2590
0 C 2591 0 G 2592 0 C 2593 0 A 2600 0 A 2601 0 G
2602 0 G 2603 0 A 2604 0 G 2616 0 G 2618 0 UR3
2619 0 U 2620 0 A 2637 0 G 2638 0 G 2639 0 G 2643
0 C 2644 0 U 2645 0 G 2646 0 MG 8023 0 DC 75 4 5
AA 76 4
26 1.35 1.35 296.8 -1.11 -0.66 11.3 82 10 2 4 3 2 0 0  C 29 0 C 31 0 C 87 0 G 307 0 C 309 0 U 310 0 C
311 0 U 312 0 G 314 0 A 316 0 A 317 0 C 318 0 A
319 0 G 320 0 A 321 0 G 322 0 C 323 0 C 330 0 G
332 0 G 333 0 G 334 0 U 335 0 A 337 0 C 338 0 A
339 0 A 340 0 C 341 0 A 462 0 A 466 0 G 467 0 A
476 0 G 479 0 C 480 0 U 481 0 G 482 0 C 483 0 A
484 0 G 514 0 A 844 0 U 845 0 C 1342 0 A 1427 0 C
1428 0 C 1983 0 G 2099 0 A 2103 0 C 2496 0 A 2497
0 C 2498 0 U 2527 0 G 2540 0 C 2555 0 C 2556 0 U
2557 0 C 2560 0 C 2565 0 A 2566 0 G 2567 0 A 2568
0 A 2569 0 G 2570 0 C 2571 0 U 2590 0 C 2591 0 G
2592 0 C 2593 0 A 2600 0 A 2601 0 G 2602 0 G 2603
0 A 2604 0 G 2616 0 G 2618 0 UR3 2619 0 U 2620 0
A 2637 0 G 2638 0 G 2639 0 G 2643 0 C 2644 0 U
2645 0 G 2646 0 MG 8023 0 MG 8068 0 DC 75 4 5AA
76 4
27 2.39 2.39 288.7 -1.06 -0.75 12.8 87 11 10 3 3 0 0 0  C 31 0 G 32 0 G 33 0 U 35 0 C 36 0 A 37 0 G 50 0
C 62 0 U 63 0 G 64 0 C 85 0 A 86 0 A 151 0 G 209
0 C 440 0 A 441 0 A 442 0 C 443 0 A 459 0 C 461 0
A 462 0 A 463 0 G 464 0 G 479 0 C 480 0 A 495 0 A
497 0 G 514 0 U 645 0 G 646 0 U 647 0 G 648 0 U
649 0 C 650 0 A 665 0 A 666 0 A 750 0 U 751 0 G
752 0 U 753 0 G 754 0 G 755 0 U 1279 0 G 1300 0 A
1348 0 G 1349 0 U 1350 0 G 1351 0 C 1353 0 U 1388
0 G 1389 0 A 1390 0 G 1391 0 G 1410 0 A 1411 0 C
1421 0 U 1422 0 C 1423 0 A 1424 0 G 1425 0 C 1426
0 U 1435 0 C 1436 0 A 1437 0 G 1438 0 G 1441 0 C
1545 0 G 1546 0 A 1547 0 U 1548 0 C 1549 0 A 1550
0 C 1551 0 C 1564 0 C 1565 0 C 1566 0 A 1567 0 G
1568 0 U 1569 0 C 1680 0 A 1685 0 A 1717 0 G 1718
0 G 1719 0 C 1720 0 NA 9104 C
28 1.73 1.89 296.6 -1.06 -0.68 10.4 86 11 3 6 4 1 0 0  C 29 0 C 31 0 C 87 0 G 307 0 C 309 0 U 310 0 C
311 0 U 312 0 G 314 0 A 316 0 A 317 0 C 318 0 A
319 0 G 320 0 A 321 0 G 322 0 C 323 0 C 330 0 G
332 0 G 333 0 G 334 0 U 335 0 A 337 0 C 338 0 A
339 0 A 340 0 C 341 0 A 462 0 A 466 0 G 467 0 A
476 0 G 479 0 C 480 0 U 481 0 G 482 0 C 483 0 A
484 0 G 514 0 U 825 0 G 828 0 G 830 0 U 831 0 C
839 0 A 844 0 U 845 0 A 846 0 C 847 0 C 848 0 C
849 0 U 850 0 C 1342 0 G 1378 0 A 1379 0 A 1381 0
C 1403 0 C 1404 0 U 1405 0 A 1407 0 A 1427 0 C
1428 0 A 1712 0 G 1713 0 C 1714 0 C 1808 0 G 1809
0 C 1810 0 G 1837 0 U 1838 0 G 2099 0 A 2103 0 C
2644 0 U 2645 0 G 2646 0 C 2728 0 C 2729 0 G 2730
0 G 2731 0 U 2732 0 A 2741 0 G 2742 0 A 2743 0 G
2744 0 C 2745 0 A 2746 0 C 2747 0 G 2748 0 U 2749
0 G 2750 0 U 2866 0 G 2867 0 C 2868 0 A 2885 0 C
2886 0 MG 8024 0 MG 8048 0 NA 9179 0
29 1.35 1.35 343.0 -1.06 -0.75 11.3 84 10 7 4 2 1 2 0  G 958 0 C 959 0 G 960 0 C 1000 0 U 1001 0 G 1002
0 U 1003 0 G 1119 0 U 1120 0 G 1121 0 G 1131 0 A
1132 0 A 1133 0 G 1224 0 C 1225 0 G 1226 0 C 1227
0 C 1228 0 C 1229 0 A 1230 0 A 1231 0 C 2351 0 U
2499 0 A 2553 0 U 2554 0 C 2555 0 C 2556 0 U 2557
0 C 2560 0 C 2565 0 A 2566 0 G 2567 0 A 2568 0 A
2569 0 G 2570 0 C 2571 0 G 2572 0 G 2573 0 G 2574
0 C 2575 0 A 2776 0 MG 8068 0 G 3014 9 C 3015 9 G
3016 9 U 3023 9 U 3024 9 C 3027 9 U 3028 9 C 3029
9 C 3030 9 C 3031 9 G 3032 9 U 3033 9 A 3044 9 A
3045 9 C 3048 9 A 3052 9 G 3053 9 G 3058 9 C 3059
9 C 3060 9 G 3066 9 C 3067 9 G 3068 9 A 3077 9 U
3079 9 A 3080 9 G 3090 9 C 3091 9 G 3092 9 C 3095
9 C 3096 9 A 3105 9 C 3106 9 C 3107 9 C 3108 9
30 1.63 1.79 495.2 -1.10 -0.76 11.8 84 16 11 5 2 1 3 0  G 958 0 C 959 0 G 960 0 C 1000 0 U 1001 0 G 1002
0 U 1003 0 U 1120 0 G 1121 0 G 1131 0 A 1132 0 A
1133 0 G 1224 0 C 1225 0 G 1226 0 C 1227 0 A 1230
0 A 1231 0 A 1232 0 G 1235 0 A 1236 0 A 1729 0 G
1730 0 C 1808 0 G 1809 0 C 1810 0 A 2083 0 C 2084
0 C 2351 0 G 2352 0 U 2550 0 C 2551 0 C 2552 0 A
2577 0 G 2578 0 U 2655 0 G 2658 0 U 2659 0 U 2669
0 G 2670 0 A 2677 0 A 2678 0 G 2679 0 G 2730 0 G
2731 0 U 2732 0 A 2741 0 G 2742 0 A 2743 0 G 2809
0 A 2812 0 A 2813 0 G 2829 0 U 2830 0 C 2831 0 C
2832 0 C 2833 0 G 2834 0 C 2835 0 G 2836 0 G 2842
0 A 2843 0 C 2844 0 G 2845 0 C 2846 0 A 2854 0 G
2855 0 A 2856 0 C 2857 0 U 2858 0 C 2859 0 U 2866
0 G 2867 0 C 2868 0 A 2885 0 C 2886 0 C 2893 0 C
2894 0 C 2895 0 A 2896 0 C 2897 0 G 2898 0 G 3014
9 C 3015 9 G 3016 9 U 3023 9 C 3027 9 U 3028 9 C
3029 9 C 3030 9 C 3031 9 G 3032 9 U 3033 9 A 3044
9 A 3045 9 C 3048 9 A 3052 9 G 3053 9 G 3058 9 C
3059 9 C 3060 9 G 3066 9 C 3067 9 G 3068 9 A 3077
9 U 3079 9 A 3080 9 G 3090 9 C 3091 9 G 3092 9 C
3095 9 C 3096 9 A 3105 9 C 3106 9 C 3107 9 C 3108
9
31 1.16 1.16 26.0 -0.77 -0.80 8.6 74 1 1 0 0 0 0 0  A 1166 0 G 1167 0 C 1168 0 U 1170 0 G 1172 0 A
1173 0 A 1174 0 C 1176 0 G 1178 0 C 1179 0 U 1180
0 A 1181 0 C 1182 0 A 1193 0 A 1194 0
32 1.08 1.08 26.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1172 0 A 1173 0 C 1176 0 A 1177 0 G 1178 0 C
1179 0 U 1180 0 A 1181 0 C 1182 0 A 1194 0 A 1199
0 A 1200 0 C 1201 0
33 1.14 1.14 35.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 1161 0 G 1162 0 G 1163 0 G 1175 0 C 1176 0 A
1177 0 C 1183 0 C 1184 0 U 1185 0 G 1190 0 A 1191
0 A 1192 0 A 1193 0 G 1197 0 U 1198 0 A 1200 0 C
1201 0 A 1202 0 G 1203 0
34 2.51 2.52 40.8 -0.70 -0.72 5.2 67 0 1 0 0 0 1 0  A 1161 0 G 1162 0 G 1163 0 U 1164 0 G 1165 0 A
1173 0 A 1174 0 G 1175 0 C 1183 0 C 1184 0 U 1185
0 G 1190 0 A 1191 0 A 1192 0 A 1193 0 C 1201 0 A
1202 0
35 1.12 1.12 64.4 -0.62 -0.75 5.0 67 0 1 0 0 0 1 0  G 1162 0 U 1164 0 G 1165 0 A 1173 0 A 1174 0 G
1175 0 C 1176 0 A 1177 0 G 1197 0 U 1198 0 A 1200
0 C 1201 0 A 1202 0 G 1203 0

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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