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PDBsum entry 1voz
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Tunnel analysis for: 1voz calculated with  MOLE 2.0
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PDB id
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1voz
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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14 tunnels,
coloured by tunnel radius |
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14 tunnels,
coloured by
tunnel radius
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14 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.23 |
1.22 |
53.6 |
-1.07 |
-0.45 |
12.1 |
69 |
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3 |
1 |
0 |
0 |
2 |
1 |
0 |
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C 40 A G 41 A G 42 A C 43 A G 44 A U 45 A A 373 A
A 374 A U 375 A C 390 A G 391 A G 392 A G 394 A C
395 A G 396 A C 398 A G 450 A G 481 A A 482 A C
483 A
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2 |
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1.23 |
1.23 |
58.2 |
-1.20 |
-0.32 |
13.4 |
72 |
5 |
2 |
0 |
1 |
3 |
1 |
0 |
A 373 A A 374 A U 375 A C 390 A G 391 A G 450 A G
481 A A 482 A C 483 A G 604 A A 608 A U 626 A G
627 A G 628 A G 630 A
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3 |
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1.23 |
1.23 |
58.7 |
-0.78 |
-0.49 |
8.4 |
68 |
2 |
1 |
0 |
0 |
2 |
1 |
0 |
U 45 A G 57 A C 355 A A 356 A C 366 A U 368 A C
369 A C 370 A A 373 A A 374 A U 375 A G 388 A A
389 A C 390 A G 391 A G 392 A G 394 A G 450 A G
481 A A 482 A C 483 A
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4 |
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1.22 |
1.22 |
67.8 |
-0.67 |
-0.60 |
6.8 |
68 |
2 |
1 |
0 |
0 |
2 |
1 |
0 |
U 45 A G 46 A C 47 A G 113 A A 353 A C 355 A A
356 A G 357 A U 358 A U 359 A A 360 A C 366 A U
367 A A 373 A A 374 A U 375 A C 390 A G 391 A G
392 A G 450 A G 481 A A 482 A C 483 A
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5 |
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1.22 |
1.22 |
70.4 |
-0.56 |
0.17 |
13.2 |
73 |
6 |
2 |
0 |
8 |
5 |
2 |
0 |
A 373 A A 374 A U 375 A C 390 A G 391 A G 450 A G
481 A A 482 A C 483 A A 608 A
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6 |
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1.21 |
1.21 |
70.7 |
-0.99 |
-0.24 |
11.9 |
77 |
5 |
2 |
2 |
1 |
4 |
1 |
0 |
G 44 A C 308 A A 373 A A 374 A U 375 A C 390 A G
391 A G 450 A G 481 A A 482 A C 483 A A 609 A G
616 A G 617 A C 623 A C 624 A
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7 |
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1.21 |
1.21 |
96.5 |
-1.04 |
-0.50 |
13.1 |
74 |
8 |
2 |
1 |
2 |
3 |
1 |
0 |
G 29 A U 30 A U 45 A C 295 A U 296 A C 307 A C
308 A A 373 A A 374 A U 375 A C 390 A G 391 A G
450 A G 481 A A 482 A C 483 A A 609 A G 610 A A
611 A A 614 A C 615 A A 622 A C 623 A C 624 A
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8 |
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1.27 |
1.45 |
100.6 |
-0.69 |
-0.63 |
7.3 |
69 |
3 |
1 |
0 |
0 |
2 |
1 |
0 |
U 45 A C 110 A G 111 A G 112 A G 113 A U 114 A C
307 A C 308 A C 312 A A 313 A C 314 A A 315 A G
316 A C 328 A A 329 A C 330 A G 332 A G 333 A C
334 A C 335 A C 336 A C 337 A C 339 A G 347 A G
348 A A 349 A G 350 A G 351 A A 373 A A 374 A U
375 A C 390 A G 391 A G 392 A G 450 A G 481 A A
482 A C 483 A
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9 |
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1.20 |
1.20 |
99.7 |
-0.72 |
-0.54 |
8.6 |
75 |
6 |
1 |
1 |
1 |
3 |
1 |
0 |
U 5 A G 29 A U 30 A U 45 A G 293 A U 294 A C 295
A U 296 A G 299 A A 300 A C 307 A C 308 A A 373 A
A 374 A U 375 A C 390 A G 391 A G 450 A G 481 A A
482 A C 483 A A 609 A G 610 A A 611 A C 612 A A
622 A C 623 A C 624 A G 631 A
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10 |
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1.22 |
1.22 |
101.0 |
-0.69 |
-0.46 |
10.5 |
84 |
7 |
2 |
3 |
3 |
3 |
1 |
0 |
G 6 A G 7 A G 29 A U 30 A U 45 A C 295 A U 296 A
A 298 A C 307 A C 308 A A 373 A A 374 A U 375 A C
390 A G 391 A G 450 A G 481 A A 482 A C 483 A A
609 A G 610 A C 612 A A 622 A C 623 A C 624 A
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11 |
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1.25 |
1.25 |
107.0 |
-1.10 |
-0.38 |
14.7 |
73 |
9 |
4 |
1 |
3 |
6 |
2 |
0 |
G 27 A G 28 A G 29 A U 30 A U 45 A C 295 A U 296
A C 307 A C 308 A A 373 A A 374 A U 375 A C 390 A
G 391 A G 450 A G 481 A A 482 A C 483 A A 509 A A
510 A C 543 A G 544 A A 609 A G 610 A A 622 A C
623 A C 624 A
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12 |
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1.25 |
1.25 |
110.8 |
-0.58 |
-0.68 |
5.8 |
69 |
3 |
1 |
0 |
0 |
2 |
1 |
0 |
U 45 A C 110 A G 111 A G 112 A G 113 A U 114 A A
119 A A 120 A C 121 A G 231 A G 232 A C 233 A G
251 A C 267 A C 307 A C 308 A C 311 A C 312 A A
313 A G 317 A G 318 A G 319 A C 320 A C 328 A A
373 A A 374 A U 375 A C 390 A G 391 A G 392 A G
450 A G 481 A A 482 A C 483 A C 1424 A U 1425 A C
1426 A G 1467 A A 1468 A G 1469 A
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13 |
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1.22 |
1.22 |
118.6 |
-0.64 |
-0.65 |
6.4 |
70 |
3 |
1 |
1 |
0 |
2 |
1 |
0 |
U 45 A C 110 A G 111 A G 112 A G 113 A U 114 A C
121 A G 231 A G 232 A C 233 A G 259 A G 265 A C
267 A C 268 A C 269 A C 307 A C 308 A C 311 A C
312 A A 313 A C 320 A A 321 A C 328 A A 373 A A
374 A U 375 A C 390 A G 391 A G 392 A G 450 A G
481 A A 482 A C 483 A C 1437 A G 1438 A C 1439 A
G 1464 A C 1465 A C 1466 A
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14 |
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1.22 |
1.22 |
134.9 |
-1.20 |
-0.42 |
15.4 |
77 |
11 |
4 |
2 |
4 |
6 |
1 |
0 |
A 8 A G 9 A A 10 A G 11 A A 26 A G 27 A G 28 A G
29 A U 30 A U 45 A C 295 A U 296 A C 307 A C 308
A A 373 A A 374 A U 375 A C 390 A G 391 A G 450 A
G 481 A A 482 A C 483 A G 505 A G 506 A C 507 A C
508 A U 512 A U 534 A A 609 A G 610 A A 622 A C
623 A C 624 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program