PDBsum entry 1vlr Go to PDB code:  Pore analysis for: 1vlr calculated with MOLE 2.0 PDB id 1vlr Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.60 2.60 39.9 -2.30 -0.54 30.3 81 7 5 2 2 1 2 0   2 2.75 5.05 46.2 -1.87 -0.47 26.4 79 7 6 3 2 2 3 0   3 2.07 4.48 48.8 -1.73 -0.14 22.5 77 8 4 2 3 3 1 0   4 1.76 1.94 51.8 -1.01 0.08 15.7 75 7 2 4 6 6 1 0   5 1.74 1.94 52.4 -1.42 -0.14 18.9 78 6 3 5 5 4 2 0   6 2.34 3.09 54.1 -1.58 -0.24 22.5 78 8 5 4 3 4 2 0   7 1.74 1.94 61.8 -1.64 -0.29 19.1 78 7 4 4 3 3 1 0   8 1.78 2.10 65.6 -2.15 -0.58 23.5 83 8 6 6 2 2 3 0   9 1.75 1.94 72.2 -1.43 -0.29 19.9 79 7 5 6 4 4 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.