PDBsum entry 1vla Go to PDB code:  Pore analysis for: 1vla calculated with MOLE 2.0 PDB id 1vla Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.67 1.67 31.4 -1.83 -0.37 27.4 86 6 3 2 3 1 0 0  MSE 1 B 2 1.22 1.38 40.5 -0.54 -0.20 12.7 79 4 3 0 7 2 1 0  MSE 47 C MSE 52 C MSE 1 D MSE 9 D MSE 23 D 3 1.31 1.34 42.7 -0.30 -0.32 9.1 83 5 2 1 6 1 1 0  MSE 1 C MSE 9 C MSE 23 C MSE 47 D MSE 52 D 4 1.23 1.36 55.7 -0.08 -0.17 9.2 84 3 3 2 7 2 1 0  MSE 47 C MSE 52 C MSE 1 D MSE 9 D MSE 23 D 5 1.37 1.55 60.7 -2.05 -0.30 30.3 83 8 4 2 1 1 0 0   6 1.35 1.36 69.4 -0.02 -0.21 9.3 83 6 4 1 8 2 2 0  MSE 47 A MSE 52 A MSE 1 B MSE 9 B MSE 10 B MSE 23 B MSE 9 C MSE 10 C MSE 52 D 7 1.90 1.85 78.1 -0.95 -0.29 17.3 81 10 6 1 6 3 2 0  MSE 9 A MSE 10 A MSE 1 B MSE 52 B MSE 52 C MSE 9 D MSE 10 D 8 1.23 1.33 85.5 -0.32 -0.15 13.6 81 6 6 1 10 4 2 0  MSE 9 A MSE 10 A MSE 1 B MSE 52 B MSE 47 C MSE 52 C MSE 1 D MSE 9 D MSE 10 D MSE 23 D 9 1.16 1.46 107.2 -2.21 -0.54 26.9 87 15 5 4 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.