spacer
spacer

PDBsum entry 1vhx

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 1vhx calculated with MOLE 2.0 PDB id
1vhx
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 pore, coloured by radius 1 pore, coloured by radius 1 pore, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.94 1.96 29.1 0.56 -0.21 6.1 83 2 2 0 10 0 1 0  MSE 106 A MSE 124 A MSE 128 A MSE 106 B MSE 124 B
MSE 128 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer