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PDBsum entry 1vfo
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Pore analysis for: 1vfo calculated with  MOLE 2.0
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PDB id
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1vfo
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.84 |
1.89 |
47.3 |
-1.65 |
-0.30 |
26.7 |
79 |
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5 |
5 |
3 |
6 |
4 |
0 |
0 |
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2 |
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1.60 |
1.91 |
78.0 |
-1.69 |
-0.24 |
26.2 |
79 |
10 |
9 |
3 |
5 |
5 |
1 |
0 |
GLC 1 C GLC 5 C GLC 6 C GLC 7 C
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3 |
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1.57 |
1.80 |
92.2 |
-1.43 |
-0.16 |
22.7 |
69 |
7 |
8 |
1 |
5 |
12 |
2 |
0 |
GLC 1 C GLC 5 C GLC 6 C GLC 7 C GLC 4 D GLC 5 D
BGC 6 D GLC 7 D
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4 |
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1.88 |
1.93 |
119.7 |
-1.77 |
-0.47 |
22.9 |
82 |
14 |
9 |
6 |
8 |
3 |
2 |
0 |
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5 |
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1.67 |
1.67 |
140.5 |
-1.74 |
-0.40 |
22.6 |
81 |
17 |
10 |
8 |
10 |
4 |
3 |
0 |
GLC 4 D GLC 5 D BGC 6 D GLC 7 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program