PDBsum entry 1vff Go to PDB code:  Tunnel analysis for: 1vff calculated with MOLE 2.0 PDB id 1vff Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.49 1.49 17.7 -0.58 -0.15 2.4 75 0 0 2 3 3 1 0   2 2.10 4.54 19.6 -1.03 0.54 16.3 59 0 4 1 3 7 0 0   3 1.15 1.34 38.9 -0.24 0.08 9.4 74 3 0 2 6 5 1 0   4 1.15 1.33 44.7 -0.42 0.34 14.8 68 3 3 3 7 9 1 0   5 1.37 1.42 16.3 -0.29 0.05 12.1 72 3 0 0 5 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.