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PDBsum entry 1vfe
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Tunnel analysis for: 1vfe calculated with  MOLE 2.0
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PDB id
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1vfe
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.75 |
1.79 |
24.0 |
-0.89 |
-0.40 |
13.6 |
87 |
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3 |
3 |
4 |
1 |
3 |
0 |
0 |
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CO3 401 A
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2 |
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1.55 |
1.99 |
31.1 |
-0.57 |
-0.36 |
10.6 |
90 |
1 |
3 |
7 |
2 |
3 |
1 |
0 |
CO3 401 A
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3 |
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1.14 |
1.32 |
19.1 |
-0.61 |
-0.10 |
5.8 |
69 |
2 |
0 |
1 |
1 |
4 |
1 |
0 |
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4 |
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1.14 |
1.33 |
19.6 |
-0.06 |
-0.29 |
4.4 |
81 |
1 |
0 |
0 |
4 |
2 |
1 |
0 |
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5 |
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1.14 |
1.31 |
20.3 |
-0.48 |
-0.37 |
6.0 |
73 |
2 |
0 |
0 |
2 |
2 |
1 |
0 |
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6 |
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1.26 |
2.30 |
15.2 |
-1.59 |
-0.29 |
18.1 |
80 |
4 |
1 |
2 |
0 |
3 |
0 |
0 |
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7 |
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1.26 |
2.43 |
17.8 |
-1.93 |
-0.33 |
20.8 |
83 |
3 |
1 |
2 |
1 |
2 |
0 |
0 |
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8 |
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1.08 |
1.08 |
15.5 |
-0.96 |
-0.06 |
20.3 |
76 |
2 |
2 |
0 |
4 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program