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PDBsum entry 1vep

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Cleft analysis for: 1vep PDB id
1vep
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2231.30 0.94 76.88 1 15.09 1 10.18 2 7 7 9 13 5 7 2 GLC 900[A], BGC 901[A], GLC 902[A],
GLC 903[A] (46 atoms)
2 2362.50 0.00 68.33 2 12.28 2 7.48 8 5 4 14 16 6 7 0  
3 1039.08 0.00 64.36 5 12.20 3 11.17 1 4 2 3 4 4 4 0  
4 1512.00 0.00 64.22 6 7.64 8 7.37 9 8 6 6 6 3 3 0  
5 1176.61 0.00 60.08 9 7.80 7 8.87 4 6 7 5 4 1 1 0  
6 1144.55 0.00 63.98 7 6.34 10 7.85 7 4 3 8 3 3 8 0  
7 1108.69 0.00 61.69 8 7.83 6 8.80 5 3 5 5 4 3 4 2  
8 701.16 0.00 65.29 4 9.71 5 7.25 10 0 1 5 4 3 4 0 GLC 904[A], GLC 905[A] (23 atoms)
9 659.81 0.00 65.95 3 10.56 4 8.39 6 4 4 2 3 1 2 0  
10 557.30 0.00 58.47 10 6.88 9 8.90 3 0 1 5 3 3 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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