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PDBsum entry 1vcu

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1vcu calculated with MOLE 2.0 PDB id
1vcu
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.30 10.7 -0.78 -0.44 9.4 88 2 0 3 3 0 1 0  
2 1.30 14.1 -1.04 -0.31 19.9 78 2 1 2 2 0 0 0  
3 1.66 1.9 -1.44 -0.26 13.3 81 0 1 0 0 1 0 0  
4 1.65 8.0 -0.15 -0.16 10.2 78 2 0 1 2 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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