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PDBsum entry 1vcu

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 1vcu PDB id
1vcu
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 10214.86 3.04 65.10 4 11.05 5 17.77 1 24 18 38 37 14 22 1  
2 3360.23 0.00 69.54 2 13.46 1 10.71 2 12 8 17 13 5 7 1 DAN 381[A], EPE 383[A] (35 atoms)
3 2833.31 0.00 67.48 3 11.37 4 10.21 3 11 6 11 11 6 8 1 DAN 381[B], EPE 383[B] (35 atoms)
4 1765.12 0.00 73.06 1 11.50 3 8.53 7 4 2 8 12 4 6 1  
5 925.59 0.00 60.43 8 7.68 8 5.93 10 4 3 3 6 3 3 0  
6 652.22 0.00 60.42 9 11.68 2 8.72 5 3 1 7 1 1 2 0  
7 623.95 0.00 61.23 7 9.05 6 8.81 4 4 3 2 2 0 1 0  
8 670.78 0.00 59.63 10 7.26 9 8.63 6 5 1 1 2 3 1 0  
9 494.02 0.00 61.62 6 4.72 10 6.82 9 2 2 1 5 1 3 0  
10 537.47 0.00 61.91 5 7.78 7 7.56 8 3 1 1 4 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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