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PDBsum entry 1vcj

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Cleft analysis for: 1vcj PDB id
1vcj
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2743.03 1.43 67.00 2 10.11 4 9.35 2 13 11 11 12 3 10 0 IBA 1[A] (25 atoms)
2 1924.59 0.00 63.41 5 10.58 3 13.72 1 11 5 1 3 5 5 2  
3 984.66 0.00 61.16 7 6.89 7 5.81 8 6 4 8 7 1 2 0  
4 771.61 0.00 63.78 4 9.42 5 8.76 3 2 0 3 5 3 4 0  
5 501.19 0.00 98.32 1 14.82 1 0.00 9 4 2 2 3 4 5 5  
6 709.59 0.00 62.73 6 6.77 8 8.05 5 1 1 7 6 3 2 0  
7 568.69 0.00 57.91 9 5.38 9 7.59 6 2 1 3 5 2 2 0  
8 485.58 0.00 55.68 10 8.38 6 8.63 4 1 1 4 3 1 1 0  
9 447.19 0.00 60.87 8 4.93 10 6.50 7 0 1 2 4 2 4 0  
10 451.83 0.00 66.03 3 11.35 2 0.00 10 2 2 2 1 1 1 1  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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