PDBsum entry 1vch Go to PDB code:  Tunnel analysis for: 1vch calculated with MOLE 2.0 PDB id 1vch Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.53 1.59 29.9 -2.33 -0.41 28.4 88 5 4 3 5 1 1 0  CL 1002 B ACY 2001 B 2 1.53 1.64 42.6 -2.12 -0.51 28.9 82 7 7 1 2 1 1 0  CL 1002 B 3 1.54 1.59 50.7 -2.33 -0.51 31.4 81 9 6 1 1 2 0 0  CL 1002 B 4 1.32 1.42 16.2 -0.69 0.15 25.9 88 4 1 0 4 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.