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PDBsum entry 1vc6

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Top Page protein dna_rna metals pores links
Pore analysis for: 1vc6 calculated with MOLE 2.0 PDB id
1vc6
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 1 pore, coloured by radius 1 pore, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.80 2.80 33.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  C 103 B C 104 B A 108 B G 129 B C 130 B G 131 B C
132 B C 133 B G 134 B G 135 B C 136 B U 137 B G
138 B G 139 B G 140 B G 161 B G 162 B U 163 B G
164 B A 165 B A 166 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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