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PDBsum entry 1v8z

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1v8z calculated with MOLE 2.0 PDB id
1v8z
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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14 tunnels, coloured by tunnel radius 14 tunnels, coloured by tunnel radius 14 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.42 10.5 -0.56 0.38 16.1 66 2 2 0 1 3 0 0  
2 1.42 14.3 -0.54 0.10 11.6 70 1 2 1 1 3 0 0  
3 1.36 10.4 -0.52 -0.29 7.2 76 1 0 0 1 1 2 0  
4 1.38 10.9 -2.48 -0.15 30.1 66 3 2 0 1 2 0 0  
5 1.37 14.5 -2.02 0.17 22.4 64 3 1 0 1 3 0 0  
6 1.33 14.3 -0.43 0.20 10.0 70 2 2 1 1 3 0 0  
7 1.50 7.1 -1.60 -0.39 29.6 83 2 1 0 2 0 0 0  
8 1.60 16.0 -1.49 -0.24 26.8 83 3 1 0 4 0 0 0  
9 1.36 11.3 0.86 0.22 1.7 71 0 0 1 3 2 2 0  
10 1.65 12.5 1.26 0.33 1.5 63 0 0 1 4 1 2 0  
11 1.36 12.5 0.69 0.22 1.7 69 0 0 1 4 2 2 0  
12 1.95 6.0 -1.05 -0.04 14.3 75 3 0 1 1 1 0 0  
13 1.93 7.6 0.10 -0.55 4.0 95 1 0 0 3 0 0 0  
14 1.96 8.6 -0.36 -0.44 11.0 87 3 0 0 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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