PDBsum entry 1v8j Go to PDB code:  Tunnel analysis for: 1v8j calculated with MOLE 2.0 PDB id 1v8j Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.11 1.36 15.8 -1.77 -0.50 28.1 90 3 1 1 2 0 0 0   2 1.11 1.36 15.8 -1.73 -0.52 26.5 88 3 1 1 1 0 0 0   3 1.09 2.10 22.6 -1.54 -0.56 24.6 91 3 2 2 1 0 0 0   4 1.09 2.10 22.7 -1.51 -0.58 23.0 91 3 2 2 1 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.